| Protein: | gi|52745937|emb|... |
| Organism: | Rattus sp. |
| Length: | 154 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52745937|emb|....
| Description | E-value | Query Range |
Subject Range |
|
|
6.0E-53 | [1..154] | [133..286] |
|
|
2.0E-51 | [1..154] | [85..238] |
|
|
4.0E-50 | [1..154] | [37..190] |
|
|
2.0E-49 | [1..154] | [1..154] |
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MADDLDFETG DAGASATFPM QCSALRKNGF VVLKGRPCKI VEMSTSKTGK HGHAKVHLVG 60
61 IDIFTGKKYE DICPSTHNMD VPNIKRNDFQ LIGIQDGYLS LLQDSGEVRE DLRLPEGDLG 120
121 KEIEQKYDCG EEILITVLSA MTEEAAVAIK AMAK
|
| Detection Method: |  |
| Confidence: | 38.0 |
| Match: | 1xtdA |
| Description: | Structural Analysis of Leishmania mexicana eukaryotic initiation factor 5a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| U6 snRNA binding | 7.69488393698619 | bayes_pls_golite062009 |
| structural constituent of ribosome | 6.60650180781768 | bayes_pls_golite062009 |
| structural molecule activity | 6.0174879876147 | bayes_pls_golite062009 |
| translation initiation factor activity | 5.09596850944863 | bayes_pls_golite062009 |
| nucleic acid binding | 3.89165617439497 | bayes_pls_golite062009 |
| translation elongation factor activity | 3.58178742491041 | bayes_pls_golite062009 |
| DNA binding | 3.38561002225202 | bayes_pls_golite062009 |
| binding | 2.83465364476231 | bayes_pls_golite062009 |
| RNA binding | 1.76502371106766 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.74890841494748 | bayes_pls_golite062009 |
| transcription regulator activity | 1.69669059514663 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.54386990150255 | bayes_pls_golite062009 |
| translation regulator activity | 1.46320772716954 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 1.40718318783582 | bayes_pls_golite062009 |
| single-stranded DNA binding | 1.38349489974693 | bayes_pls_golite062009 |
| protein binding | 1.20309946451799 | bayes_pls_golite062009 |
| transcription activator activity | 0.990244702925461 | bayes_pls_golite062009 |
| mRNA binding | 0.883475899526061 | bayes_pls_golite062009 |
| transcription factor activity | 0.859071050218437 | bayes_pls_golite062009 |
| telomeric DNA binding | 0.594907498313479 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 0.474251377131502 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 0.47336621289748 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 0.47336621289748 | bayes_pls_golite062009 |
| RNA polymerase activity | 0.39251242706379 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 0.39251242706379 | bayes_pls_golite062009 |
| ribonuclease activity | 0.35186207828037 | bayes_pls_golite062009 |
| nuclease activity | 0.26446253803519 | bayes_pls_golite062009 |
