| Protein: | gi|42573533 |
| Organism: | Arabidopsis thaliana |
| Length: | 434 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42573533.
| Description | E-value | Query Range |
Subject Range |
|
|
326.0 | [0..1] | [434..1] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MQVIASFCSK PNENEFVGRR QLLSSVCSKI SQGDVVSHPP VSSVKVTQDW KSNLHELAVK 60
61 SVPSTTRRIL LTSLFMNLCF NPSRYLSALA LGDPSVATVE DVSPTVFP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [109-434] |
1 11 21 31 41 51
| | | | | |
1 AGPLFPTEGR IVQLFEKNTY SVVNIFDVTL RPQLKMTGVV EIPEGNGSGV VWDGQGYIVT 60
61 NYHVIGNALS RNPSPGDVVG RVNILASDGV QKNFEGKLVG ADRAKDLAVL KVDAPETLLK 120
121 PIKVGQSNSL KVGQQCLAIG NPFGFDHTLT VGVISGLNRD IFSQTGVTIG GGIQTDAAIN 180
181 PGNSGGPLLD SKGNLIGINT AIFTQTVLKI VPQLIQFSKV LRAGINIELA PDPVANQLNV 240
241 RNGALVLQVP GKSLAEKAGL HPTSRGFAGN IVLGDIIVAV DDKPVKNKAE LMKILDEYSV 300
301 GDKVTLKIKR GNEDLELKIS LEEKSS
|
| Detection Method: | |
| Confidence: | 58.0 |
| Match: | 1ky9A |
| Description: | Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.45528883298499 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.08053412162226 | bayes_pls_golite062009 |
| endopeptidase activity | 3.78841204092284 | bayes_pls_golite062009 |
| serine-type peptidase activity | 3.58347664461084 | bayes_pls_golite062009 |
| serine hydrolase activity | 3.58106288341801 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 3.36658782366155 | bayes_pls_golite062009 |
| hydrolase activity | 2.78416408149092 | bayes_pls_golite062009 |
| catalytic activity | 1.40927913545237 | bayes_pls_golite062009 |
