| Protein: | NRPE7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 178 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NRPE7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
143.0 | [0..15] | [173..269] |
|
Region A: Residues: [1-178] |
1 11 21 31 41 51
| | | | | |
1 MFLKVQLPWN VMIPAENMDA KGLMLKRAIL VELLEAFASK KATKELGYYV AVTTLDKIGE 60
61 GKIREHTGEV LFPVMFSGMT FKIFKGEIIH GVVHKVLKHG VFMRCGPIEN VYLSYTKMPD 120
121 YKYIPGENPI FMNEKTSRIQ VETTVRVVVI GIKWMEVERE FQALASLEGD YLGPLSEE
|
| Detection Method: |  |
| Confidence: | 32.0 |
| Match: | 1go3E |
| Description: | C-terminal domain of RNA polymerase II subunit RBP4 (RpoE); N-terminal, heterodimerisation domain of RBP4 (RpoE) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA polymerase activity | 5.58573473432218 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 5.58573473432218 | bayes_pls_golite062009 |
| nucleic acid binding | 3.87899047526266 | bayes_pls_golite062009 |
| DNA binding | 3.47278447192966 | bayes_pls_golite062009 |
| binding | 3.35781855253373 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 3.34659726705133 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 2.11041791332208 | bayes_pls_golite062009 |
| transcription regulator activity | 2.10110937001387 | bayes_pls_golite062009 |
| transferase activity | 2.03373182784225 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.81524862921454 | bayes_pls_golite062009 |
| single-stranded DNA binding | 1.62996999055328 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.51215866188241 | bayes_pls_golite062009 |
| ribonuclease activity | 1.19236946227657 | bayes_pls_golite062009 |
| structural molecule activity | 1.16496993393687 | bayes_pls_golite062009 |
| transcription factor activity | 0.937752547283357 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.76825863122436 | bayes_pls_golite062009 |
| protein binding | 0.767256907671421 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.583085644017496 | bayes_pls_golite062009 |
| nuclease activity | 0.57381531077345 | bayes_pls_golite062009 |
| translation regulator activity | 0.515576958825022 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.468402630523277 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.2080607201312 | bayes_pls_golite062009 |
| RNA binding | 0.18502033889261 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 0.125256208482441 | bayes_pls_golite062009 |
| exoribonuclease activity | 0.109774918833391 | bayes_pls_golite062009 |
| chromatin binding | 0.0075451629397203 | bayes_pls_golite062009 |
