| Protein: | gi|13096204, gi|... |
| Organism: | Homo sapiens |
| Length: | 167 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|13096204, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
172.0 | [0..4] | [167..12] |
|
|
168.0 | [0..1] | [167..25] |
|
|
166.0 | [0..4] | [165..128] |
|
|
165.0 | [0..1] | [167..65] |
|
|
165.0 | [0..1] | [167..35] |
|
|
165.0 | [0..4] | [162..12] |
|
|
165.0 | [0..4] | [162..12] |
|
Region A: Residues: [1-167] |
1 11 21 31 41 51
| | | | | |
1 SKTNLIVNYL PQNMTQEEFR SLFGSIGEIE SCKLVRDKIT GQSLGYGFVN YIDPKDAEKA 60
61 INTLNGLRLQ TKTIKVSYAR PSSASIRDAN LYVSGLPKTM TQKELEQLFS QYGRIITSRI 120
121 LVDQVTGVSR GVGFIRFDKR IEAEEAIKGL NGQKPSGATE PITVKFA
|
| Detection Method: |  |
| Confidence: | 41.0 |
| Match: | 1fxlA |
| Description: | Hu antigen D (Hud) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 5.15097136329571 | bayes_pls_golite062009 |
| nucleic acid binding | 4.92126426323641 | bayes_pls_golite062009 |
| mRNA binding | 4.05281507540116 | bayes_pls_golite062009 |
| binding | 3.64400841800969 | bayes_pls_golite062009 |
| 2.83802439076672 | bayes_pls_golite062009 | |
| transcription regulator activity | 1.92450390013691 | bayes_pls_golite062009 |
| DNA binding | 1.8021593476478 | bayes_pls_golite062009 |
| poly-pyrimidine tract binding | 1.69629099229571 | bayes_pls_golite062009 |
| single-stranded RNA binding | 1.46469774223879 | bayes_pls_golite062009 |
| transcription factor activity | 1.15127506309683 | bayes_pls_golite062009 |
| protein binding | 1.12215421354121 | bayes_pls_golite062009 |
| transcription repressor activity | 1.06887262556449 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.824614388276642 | bayes_pls_golite062009 |
| mRNA 5'-UTR binding | 0.625848256054783 | bayes_pls_golite062009 |
| translation repressor activity, nucleic acid binding | 0.461000905454505 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.43716526938634 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.383589644462932 | bayes_pls_golite062009 |
| snRNA binding | 0.249682711188639 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.2202184446161 | bayes_pls_golite062009 |
| structural molecule activity | 0.166336846372115 | bayes_pls_golite062009 |
| translation regulator activity | 0.117211881967154 | bayes_pls_golite062009 |
