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Protein Overview: gi|125604308, gi...

General Information:
Name(s) found: gi|51965094 [NCBI NR]
gi|50948431 [NCBI NR]
gi|42407939 [NCBI NR]
gi|215697914 [NCBI NR]
gi|125604308 [NCBI NR]
gi|115477771 [NCBI NR]
gi|113624450 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|51965094|ref|XP_507331.1| PREDICTED OJ1150_A11.19-2 gene product [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|50948431|ref|XP_483743.1| putative nucleic acid-binding protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|42407939|dbj|BAD09078.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215697914|dbj|BAG92121.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125604308|gb|EAZ43633.1| hypothetical protein OsJ_28256 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115477771|ref|NP_001062481.1| Os08g0557100 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113624450|dbj|BAF24395.1| Os08g0557100 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 305 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMATTSVTS LAMAMAAAAS ADATQAPHKL SALPFHHLLF SRAPPLLRAS RRLPLAPLVA  60
   61 SSDAAAAAEA GVEWSETEEA DEGSQEEEEE EVVEEQAEAE EEVVASVEEE EEEAVEEEFA 120
  121 AEPPEEAKVY VGNLPYDVDS EGLAQLFEQA GVVEVAEVIY NRETGQSRGF GFVTMSTIEE 180
  181 ADKAIEMLNR YDINGRLLNV NRAAPRGSRV ERPPRQFAPA FRAYVGNLPW QVDDSRLLQL 240
  241 FSEHGEVVNA SVVYDRESGR SRGFGFVSMA SKEELDDAIS ALDGQELDGR PLRVNVAAER 300
  301 PQRGF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123] PSI-BLAST 25.0 No description for 2g4bA was found.
    2 View Details [124..305] PSI-BLAST 40.522879 Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.86761524461453 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.984778969024386 bayes_pls_golite062009
  • protein binding
    		•  0.426607329742248 bayes_pls_golite062009
  • RNA binding
    		•  0.0622892880461364 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle