| Protein: | gi|125604308, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 305 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125604308, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
260.0 | [0..9] | [303..80] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MAMATTSVTS LAMAMAAAAS ADATQAPHKL SALPFHHLLF SRAPPLLRAS RRLPLAPLVA 60
61 SSDAAAAAEA GVEWSETEEA DEGSQEEEEE EVVEEQAEAE EEVVASVEEE EEEAVEEEFA 120
121 AEP
|
| Detection Method: |  |
| Confidence: | 25.0 |
| Match: | 2g4bA |
| Description: | No description for 2g4bA was found. |
|
Region A: Residues: [124-305] |
1 11 21 31 41 51
| | | | | |
1 PEEAKVYVGN LPYDVDSEGL AQLFEQAGVV EVAEVIYNRE TGQSRGFGFV TMSTIEEADK 60
61 AIEMLNRYDI NGRLLNVNRA APRGSRVERP PRQFAPAFRA YVGNLPWQVD DSRLLQLFSE 120
121 HGEVVNASVV YDRESGRSRG FGFVSMASKE ELDDAISALD GQELDGRPLR VNVAAERPQR 180
181 GF
|
| Detection Method: | |
| Confidence: | 40.522879 |
| Match: | 1pgzA |
| Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.86761524461453 | bayes_pls_golite062009 |
| nucleic acid binding | 0.984778969024386 | bayes_pls_golite062009 |
| protein binding | 0.426607329742248 | bayes_pls_golite062009 |
| RNA binding | 0.0622892880461364 | bayes_pls_golite062009 |
