From Publication:  Qiu J, Noble WS (2008) Predicting CoComplexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 
Notes:  Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.679749244953] 
Complex Size:  2 proteins 
Protein 
GO Cellular Component  GO Biological Process  GO Molecular Function 
COQ6 



GUT2 



Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the pvalue represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a pvalue less than or equal to 0.01.
GO Term 
Pvalue 
A 
B 
I 
T 
mitochondrial membrane  1.7808E3  2  266  2  6292 
mitochondrial envelope  2.4514E3  2  312  2  6292 
integral to mitochondrial outer membrane  4.1283E3  2  13  1  6292 
intrinsic to mitochondrial outer membrane  4.1283E3  2  13  1  6292 
integral to mitochondrial membrane  4.4455E3  2  14  1  6292 
mitochondrial part  5.6881E3  2  475  2  6292 
envelope  6.43E3  2  505  2  6292 
organelle envelope  6.43E3  2  505  2  6292 
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the pvalue represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a pvalue less than or equal to 0.01.
GO Term 
Pvalue 
A 
B 
I 
T 
oxidoreduction coenzyme metabolic process  8.6451E5  2  59  2  6292 
coenzyme metabolic process  3.6076E4  2  120  2  6292 
cofactor metabolic process  5.9526E4  2  154  2  6292 
quinone cofactor metabolic process  3.4937E3  2  11  1  6292 
ubiquinone metabolic process  3.4937E3  2  11  1  6292 
ubiquinone biosynthetic process  3.4937E3  2  11  1  6292 
quinone cofactor biosynthetic process  3.4937E3  2  11  1  6292 
NADH oxidation  3.811E3  2  12  1  6292 
NADH metabolic process  4.7627E3  2  15  1  6292 
NAD metabolic process  7.9314E3  2  25  1  6292 
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the pvalue represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a pvalue less than or equal to 0.01.
GO Term 
Pvalue 
A 
B 
I 
T 
ubiquinone biosynthetic process monooxygenase activity  3.1786E4  2  1  1  6292 
glycerol3phosphate dehydrogenase activity  3.1786E4  2  1  1  6292 