| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.037] [SVM Score: 0.839693514751] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| CIT1 |
|
|
|
| SDH1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| respiratory chain complex II | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| mitochondrial respiratory chain complex II | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| succinate dehydrogenase complex (ubiquinone) | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| fumarate reductase complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| succinate dehydrogenase complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| mitochondrial part | 5.6881E-3 | 2 | 475 | 2 | 6292 |
| mitochondrial respiratory chain | 8.248E-3 | 2 | 26 | 1 | 6292 |
| respiratory chain | 8.248E-3 | 2 | 26 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| citrate (Si)-synthase activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| succinate dehydrogenase (ubiquinone) activity | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| succinate dehydrogenase activity | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| oxidoreductase activity, acting on the CH-CH group of donors | 7.6148E-3 | 2 | 24 | 1 | 6292 |