| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.982135694959] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| BLM10 |
|
|
|
| UMP1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| proteasome core complex | 5.0798E-3 | 2 | 16 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| proteasome assembly | 7.579E-7 | 2 | 6 | 2 | 6292 |
| cellular protein complex assembly | 7.2304E-5 | 2 | 54 | 2 | 6292 |
| protein complex assembly | 6.0304E-4 | 2 | 155 | 2 | 6292 |
| protein complex biogenesis | 6.0304E-4 | 2 | 155 | 2 | 6292 |
| cellular macromolecular complex assembly | 8.3223E-4 | 2 | 182 | 2 | 6292 |
| protein catabolic process | 8.9766E-4 | 2 | 189 | 2 | 6292 |
| cellular macromolecular complex subunit organization | 1.6882E-3 | 2 | 259 | 2 | 6292 |
| macromolecular complex assembly | 1.9877E-3 | 2 | 281 | 2 | 6292 |
| macromolecule catabolic process | 2.1762E-3 | 2 | 294 | 2 | 6292 |
| macromolecular complex subunit organization | 3.2108E-3 | 2 | 357 | 2 | 6292 |
| cellular component assembly | 3.7349E-3 | 2 | 385 | 2 | 6292 |
| catabolic process | 6.2027E-3 | 2 | 496 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| proteasome activator activity | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| proteasome regulator activity | 6.3568E-4 | 2 | 2 | 1 | 6292 |