| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.1633884128] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein phosphatase type 2A complex | 7.579E-7 | 2 | 6 | 2 | 6292 |
| protein serine/threonine phosphatase complex | 6.8716E-6 | 2 | 17 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein amino acid dephosphorylation | 1.9099E-5 | 2 | 28 | 2 | 6292 |
| dephosphorylation | 3.9411E-5 | 2 | 40 | 2 | 6292 |
| meiotic sister chromatid cohesion, centromeric | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| meiotic sister chromatid cohesion | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| phosphorus metabolic process | 1.3191E-3 | 2 | 229 | 2 | 6292 |
| phosphate metabolic process | 1.3191E-3 | 2 | 229 | 2 | 6292 |
| post-translational protein modification | 3.2108E-3 | 2 | 357 | 2 | 6292 |
| meiotic chromosome segregation | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| protein modification process | 6.278E-3 | 2 | 499 | 2 | 6292 |
| macromolecule modification | 8.1649E-3 | 2 | 569 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein phosphatase type 2A regulator activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| phosphatase regulator activity | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| protein phosphatase regulator activity | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| protein serine/threonine phosphatase activity | 8.248E-3 | 2 | 26 | 1 | 6292 |