| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.2215734325] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| fungal-type vacuole lumen | 1.0611E-6 | 2 | 7 | 2 | 6292 |
| vacuolar lumen | 1.819E-6 | 2 | 9 | 2 | 6292 |
| vacuolar part | 3.6682E-4 | 2 | 121 | 2 | 6292 |
| fungal-type vacuole | 6.2668E-4 | 2 | 158 | 2 | 6292 |
| lytic vacuole | 6.2668E-4 | 2 | 158 | 2 | 6292 |
| storage vacuole | 6.2668E-4 | 2 | 158 | 2 | 6292 |
| vacuole | 1.0983E-3 | 2 | 209 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| endopeptidase activity | 7.2304E-5 | 2 | 54 | 2 | 6292 |
| peptidase activity, acting on L-amino acid peptides | 2.256E-4 | 2 | 95 | 2 | 6292 |
| saccharopepsin activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| peptidase activity | 9.2646E-4 | 2 | 192 | 2 | 6292 |
| serine-type endopeptidase activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| serine-type peptidase activity | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| serine hydrolase activity | 4.1283E-3 | 2 | 13 | 1 | 6292 |