| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.30370460931] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| CNM67 |
|
|
|
| SPC72 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| outer plaque of spindle pole body | 7.579E-7 | 2 | 6 | 2 | 6292 |
| microtubule organizing center part | 6.0632E-6 | 2 | 16 | 2 | 6292 |
| microtubule organizing center | 9.8679E-5 | 2 | 63 | 2 | 6292 |
| spindle pole body | 9.8679E-5 | 2 | 63 | 2 | 6292 |
| spindle pole | 1.151E-4 | 2 | 68 | 2 | 6292 |
| spindle | 1.9786E-4 | 2 | 89 | 2 | 6292 |
| microtubule cytoskeleton | 2.8118E-4 | 2 | 106 | 2 | 6292 |
| cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
| cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| microtubule nucleation | 1.2783E-5 | 2 | 23 | 2 | 6292 |
| mitotic spindle organization | 5.6994E-5 | 2 | 48 | 2 | 6292 |
| spindle organization | 5.9419E-5 | 2 | 49 | 2 | 6292 |
| microtubule cytoskeleton organization | 2.3525E-4 | 2 | 97 | 2 | 6292 |
| microtubule-based process | 3.0847E-4 | 2 | 111 | 2 | 6292 |
| cytoskeleton organization | 1.3422E-3 | 2 | 231 | 2 | 6292 |
| mitotic cell cycle | 1.6363E-3 | 2 | 255 | 2 | 6292 |
| M phase | 2.1762E-3 | 2 | 294 | 2 | 6292 |
| cell cycle phase | 3.5621E-3 | 2 | 376 | 2 | 6292 |
| microtubule-based movement | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| microtubule-based transport | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| nuclear migration along microtubule | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| cytoskeleton-dependent intracellular transport | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| cell cycle process | 6.0534E-3 | 2 | 490 | 2 | 6292 |
| nuclear migration | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| nucleus localization | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| establishment of nucleus localization | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| mitotic spindle elongation | 6.6645E-3 | 2 | 21 | 1 | 6292 |
| spindle elongation | 6.6645E-3 | 2 | 21 | 1 | 6292 |
| cell cycle | 6.95E-3 | 2 | 525 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| structural constituent of cytoskeleton | 6.9626E-5 | 2 | 53 | 2 | 6292 |
| structural molecule activity | 2.8947E-3 | 2 | 339 | 2 | 6292 |