| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.057] [SVM Score: 0.341224901737] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| eukaryotic translation elongation factor 1 complex | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| ribosome | 2.1173E-3 | 2 | 290 | 2 | 6292 |
| ribonucleoprotein complex | 6.6615E-3 | 2 | 514 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nuclear export | 2.6542E-4 | 2 | 103 | 2 | 6292 |
| nuclear transport | 4.2367E-4 | 2 | 130 | 2 | 6292 |
| nucleocytoplasmic transport | 4.2367E-4 | 2 | 130 | 2 | 6292 |
| ribosomal small subunit export from nucleus | 2.224E-3 | 2 | 7 | 1 | 6292 |
| translation | 3.5621E-3 | 2 | 376 | 2 | 6292 |
| intracellular transport | 7.7118E-3 | 2 | 553 | 2 | 6292 |
| ribosomal small subunit biogenesis | 8.248E-3 | 2 | 26 | 1 | 6292 |
| establishment of ribosome localization | 8.248E-3 | 2 | 26 | 1 | 6292 |
| ribosome localization | 8.248E-3 | 2 | 26 | 1 | 6292 |
| ribosomal subunit export from nucleus | 8.248E-3 | 2 | 26 | 1 | 6292 |
| tRNA export from nucleus | 8.8811E-3 | 2 | 28 | 1 | 6292 |
| tRNA transport | 8.8811E-3 | 2 | 28 | 1 | 6292 |
| establishment of localization in cell | 9.0494E-3 | 2 | 599 | 2 | 6292 |
| translational elongation | 9.1975E-3 | 2 | 29 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| GDP binding | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| translation elongation factor activity | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| GTP binding | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| guanyl ribonucleotide binding | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| guanyl nucleotide binding | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| actin binding | 6.6645E-3 | 2 | 21 | 1 | 6292 |
| purine nucleoside binding | 9.8303E-3 | 2 | 31 | 1 | 6292 |