| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.055] [SVM Score: 0.386490181781] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| FPR3 |
|
|
|
| GAR1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| box H/ACA snoRNP complex | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| nucleolus | 1.1194E-3 | 2 | 211 | 2 | 6292 |
| nuclear lumen | 5.1728E-3 | 2 | 453 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| prophase | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| meiotic cell cycle checkpoint | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| meiotic prophase I | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| meiotic recombination checkpoint | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| negative regulation of meiosis | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| regulation of meiotic cell cycle | 6.9813E-3 | 2 | 22 | 1 | 6292 |
| regulation of meiosis | 6.9813E-3 | 2 | 22 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| peptidyl-prolyl cis-trans isomerase activity | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| cis-trans isomerase activity | 4.4455E-3 | 2 | 14 | 1 | 6292 |