| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.435941179865] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| RKI1 |
|
|
|
| UTP6 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| pyridoxine biosynthetic process | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| vitamin B6 biosynthetic process | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| vitamin B6 metabolic process | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| pyridoxine metabolic process | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| ribosome biogenesis | 3.0157E-3 | 2 | 346 | 2 | 6292 |
| ribonucleoprotein complex biogenesis | 3.5243E-3 | 2 | 374 | 2 | 6292 |
| pentose-phosphate shunt | 3.811E-3 | 2 | 12 | 1 | 6292 |
| NADPH regeneration | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| NADP metabolic process | 5.7138E-3 | 2 | 18 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ribose-5-phosphate isomerase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| intramolecular oxidoreductase activity, interconverting aldoses and ketoses | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| intramolecular oxidoreductase activity | 6.0308E-3 | 2 | 19 | 1 | 6292 |
| snoRNA binding | 9.8303E-3 | 2 | 31 | 1 | 6292 |