From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.628950087653] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
CEF1 |
|
|
|
PRP38 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
ribonucleoprotein complex | 6.6615E-3 | 2 | 514 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
nuclear mRNA splicing, via spliceosome | 2.4511E-4 | 2 | 99 | 2 | 6292 |
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | 2.5011E-4 | 2 | 100 | 2 | 6292 |
RNA splicing, via transesterification reactions | 2.8654E-4 | 2 | 107 | 2 | 6292 |
RNA splicing | 4.3685E-4 | 2 | 132 | 2 | 6292 |
mRNA processing | 6.1087E-4 | 2 | 156 | 2 | 6292 |
mRNA metabolic process | 1.1408E-3 | 2 | 213 | 2 | 6292 |
RNA processing | 3.6384E-3 | 2 | 380 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
first spliceosomal transesterification activity | 1.9064E-3 | 2 | 6 | 1 | 6292 |