| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.798559007722] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| endoplasmic reticulum membrane | 4.4352E-4 | 2 | 133 | 2 | 6292 |
| endoplasmic reticulum part | 5.6464E-4 | 2 | 150 | 2 | 6292 |
| subsynaptic reticulum | 5.6464E-4 | 2 | 150 | 2 | 6292 |
| nuclear membrane-endoplasmic reticulum network | 1.3539E-3 | 2 | 232 | 2 | 6292 |
| translocon complex | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| Sec61 translocon complex | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| endoplasmic reticulum lumen | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| oligosaccharyltransferase complex | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| endoplasmic reticulum | 3.3381E-3 | 2 | 364 | 2 | 6292 |
| rough endoplasmic reticulum | 3.811E-3 | 2 | 12 | 1 | 6292 |
| rough endoplasmic reticulum membrane | 3.811E-3 | 2 | 12 | 1 | 6292 |
| endomembrane system | 3.9918E-3 | 2 | 398 | 2 | 6292 |
| integral to endoplasmic reticulum membrane | 9.8303E-3 | 2 | 31 | 1 | 6292 |
| intrinsic to endoplasmic reticulum membrane | 9.8303E-3 | 2 | 31 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| posttranslational protein targeting to membrane, translocation | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| posttranslational protein targeting to membrane | 2.859E-3 | 2 | 9 | 1 | 6292 |
| SRP-dependent cotranslational protein targeting to membrane, translocation | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| SRP-dependent cotranslational protein targeting to membrane | 6.6645E-3 | 2 | 21 | 1 | 6292 |
| cotranslational protein targeting to membrane | 7.6148E-3 | 2 | 24 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| oligosaccharyl transferase activity | 3.1764E-3 | 2 | 10 | 1 | 6292 |