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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Ydr339c. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

organelle membrane 1.3252E-3 3 692 3 6292
small-subunit processome 2.8585E-3 3 6 1 6292
mitochondrial respiratory chain complex III 4.7611E-3 3 10 1 6292
respiratory chain complex III 4.7611E-3 3 10 1 6292
membrane 6.8885E-3 3 1198 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

calcium ion transport 2.3825E-3 3 5 1 6292
calcium ion homeostasis 4.2857E-3 3 9 1 6292
cellular calcium ion homeostasis 4.2857E-3 3 9 1 6292
divalent metal ion transport 4.7611E-3 3 10 1 6292
metal ion homeostasis 9.5071E-3 3 20 1 6292
cellular metal ion homeostasis 9.5071E-3 3 20 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

inorganic cation transmembrane transporter activity 7.5745E-4 3 101 2 6292
calcium-transporting ATPase activity 9.5344E-4 3 2 1 6292
cation transmembrane transporter activity 1.0335E-3 3 118 2 6292
calcium ion transmembrane transporter activity 1.4299E-3 3 3 1 6292
ion transmembrane transporter activity 1.58E-3 3 146 2 6292
ubiquinol-cytochrome-c reductase activity 4.2857E-3 3 9 1 6292
oxidoreductase activity, acting on diphenols and related substances as donors 4.2857E-3 3 9 1 6292
oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor 4.2857E-3 3 9 1 6292
substrate-specific transmembrane transporter activity 5.2316E-3 3 267 2 6292
ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism 6.6614E-3 3 14 1 6292
transmembrane transporter activity 6.8456E-3 3 306 2 6292
cation-transporting ATPase activity 7.6106E-3 3 16 1 6292
substrate-specific transporter activity 8.2289E-3 3 336 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle