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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Yhr197w. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleoplasm 6.8591E-4 5 264 3 6292
nuclear outer membrane 1.7979E-3 5 86 2 6292
nuclear membrane 2.2823E-3 5 97 2 6292
nuclear lumen 3.3223E-3 5 453 3 6292
nuclear part 4.0435E-3 5 1103 4 6292
intracellular organelle part 6.2578E-3 5 2282 5 6292
organelle part 6.2578E-3 5 2282 5 6292
outer membrane 7.5233E-3 5 178 2 6292
organelle outer membrane 7.5233E-3 5 178 2 6292
nuclear envelope 9.3452E-3 5 199 2 6292
nuclear nucleosome 9.5026E-3 5 12 1 6292
nucleosome 9.5026E-3 5 12 1 6292
organelle lumen 9.7686E-3 5 660 3 6292
intracellular organelle lumen 9.7686E-3 5 660 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosomal large subunit assembly 4.092E-4 5 41 2 6292
ribosomal subunit assembly 7.3776E-4 5 55 2 6292
ribosome assembly 9.9868E-4 5 64 2 6292
ribosomal large subunit biogenesis 1.0301E-3 5 65 2 6292
organelle assembly 1.1603E-3 5 69 2 6292
ribosome biogenesis 1.5173E-3 5 346 3 6292
ribonucleoprotein complex biogenesis 1.9042E-3 5 374 3 6292
ribonucleoprotein complex assembly 2.0552E-3 5 92 2 6292
cellular macromolecular complex assembly 7.856E-3 5 182 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle