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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Ydl100c. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

GET complex 9.6371E-10 5 4 3 6292
endoplasmic reticulum part 1.2824E-4 5 150 3 6292
subsynaptic reticulum 1.2824E-4 5 150 3 6292
endoplasmic reticulum 1.7595E-3 5 364 3 6292
cytoplasmic part 9.5281E-3 5 2482 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

retrograde vesicle-mediated transport, Golgi to ER 6.2313E-7 5 26 3 6292
Golgi vesicle transport 1.7977E-4 5 168 3 6292
vesicle-mediated transport 1.4416E-3 5 340 3 6292
transport 2.7399E-3 5 997 4 6292
establishment of localization 2.8585E-3 5 1008 4 6292
localization 3.47E-3 5 1060 4 6292
mitochondrion organization 5.815E-3 5 156 2 6292
intracellular transport 5.9002E-3 5 553 3 6292
calcium ion homeostasis 7.1338E-3 5 9 1 6292
cellular calcium ion homeostasis 7.1338E-3 5 9 1 6292
establishment of localization in cell 7.4143E-3 5 599 3 6292
cellular localization 9.0715E-3 5 643 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

anion channel activity 2.3825E-3 5 3 1 6292
voltage-gated anion channel activity 2.3825E-3 5 3 1 6292
voltage-gated channel activity 6.3431E-3 5 8 1 6292
voltage-gated ion channel activity 6.3431E-3 5 8 1 6292
gated channel activity 7.1338E-3 5 9 1 6292
ion channel activity 7.9239E-3 5 10 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle