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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Pph3. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 9 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

chaperonin-containing T-complex 4.4248E-7 9 12 3 6292
cytosolic part 5.4863E-4 9 122 3 6292
cytoskeleton 2.8751E-3 9 216 3 6292
cytosol 6.2396E-3 9 284 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein folding 1.4593E-4 9 78 3 6292
response to drug 6.3162E-4 9 128 3 6292
protein amino acid dephosphorylation 6.7442E-4 9 28 2 6292
cellular protein metabolic process 1.283E-3 9 1074 6 6292
response to chemical stimulus 1.3196E-3 9 382 4 6292
dephosphorylation 1.3793E-3 9 40 2 6292
protein metabolic process 1.7457E-3 9 1136 6 6292
invasive growth in response to glucose limitation 1.9017E-3 9 47 2 6292
seryl-tRNA aminoacylation 2.859E-3 9 2 1 6292
cytoskeleton organization 3.4816E-3 9 231 3 6292
pseudohyphal growth 3.9454E-3 9 68 2 6292
cell growth 5.8284E-3 9 83 2 6292
filamentous growth of a population of unicellular organisms 6.8239E-3 9 90 2 6292
growth of unicellular organism as a thread of attached cells 6.8239E-3 9 90 2 6292
filamentous growth 9.3697E-3 9 106 2 6292
positive regulation of transcription by pheromones 9.9746E-3 9 7 1 6292
positive regulation of transcription from RNA polymerase II promoter by pheromones 9.9746E-3 9 7 1 6292
positive regulation of gene-specific transcription from RNA polymerase II promoter 9.9746E-3 9 7 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

unfolded protein binding 6.9885E-5 9 61 3 6292
serine-tRNA ligase activity 2.859E-3 9 2 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle