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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Ino80 complex 5.2364E-3 3 11 1 6292
DNA helicase complex 5.2364E-3 3 11 1 6292
Swr1 complex 7.136E-3 3 15 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

calcium ion transport 2.3825E-3 3 5 1 6292
manganese ion transport 3.3344E-3 3 7 1 6292
divalent metal ion transport 4.7611E-3 3 10 1 6292
secretory pathway 7.6106E-3 3 16 1 6292
snoRNA metabolic process 8.5592E-3 3 18 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

phosphomannomutase activity 4.768E-4 3 1 1 6292
manganese-transporting ATPase activity 4.768E-4 3 1 1 6292
calcium-transporting ATPase activity 9.5344E-4 3 2 1 6292
calcium ion transmembrane transporter activity 1.4299E-3 3 3 1 6292
ATPase activity, coupled 1.6453E-3 3 149 2 6292
manganese ion transmembrane transporter activity 2.8585E-3 3 6 1 6292
ATPase activity 3.2839E-3 3 211 2 6292
calcium ion binding 3.3344E-3 3 7 1 6292
intramolecular transferase activity, phosphotransferases 3.3344E-3 3 7 1 6292
ATP-dependent 5'-3' DNA helicase activity 3.3344E-3 3 7 1 6292
5'-3' DNA helicase activity 3.8101E-3 3 8 1 6292
ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism 6.6614E-3 3 14 1 6292
intramolecular transferase activity 7.136E-3 3 15 1 6292
cation-transporting ATPase activity 7.6106E-3 3 16 1 6292
nucleoside-triphosphatase activity 7.8952E-3 3 329 2 6292
ATP-dependent DNA helicase activity 8.5592E-3 3 18 1 6292
hydrolase activity, acting on acid anhydrides 9.067E-3 3 353 2 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 9.067E-3 3 353 2 6292
pyrophosphatase activity 9.067E-3 3 353 2 6292

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