| From Publication: | Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22. |
| Notes: | From the published set of protein complexes (core proteins only) |
| Complex Size: | 3 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mitochondrial oxoglutarate dehydrogenase complex | 4.5469E-7 | 3 | 3 | 2 | 6292 |
| oxoglutarate dehydrogenase complex | 4.5469E-7 | 3 | 3 | 2 | 6292 |
| mitochondrial matrix | 2.1525E-5 | 3 | 176 | 3 | 6292 |
| mitochondrial lumen | 2.1525E-5 | 3 | 176 | 3 | 6292 |
| nucleoid | 4.9138E-5 | 3 | 26 | 2 | 6292 |
| mitochondrial nucleoid | 4.9138E-5 | 3 | 26 | 2 | 6292 |
| mitochondrial part | 4.2773E-4 | 3 | 475 | 3 | 6292 |
| organelle lumen | 1.1495E-3 | 3 | 660 | 3 | 6292 |
| intracellular organelle lumen | 1.1495E-3 | 3 | 660 | 3 | 6292 |
| membrane-enclosed lumen | 1.3717E-3 | 3 | 700 | 3 | 6292 |
| non-membrane-bounded organelle | 3.5313E-3 | 3 | 959 | 3 | 6292 |
| intracellular non-membrane-bounded organelle | 3.5313E-3 | 3 | 959 | 3 | 6292 |
| mitochondrion | 5.7035E-3 | 3 | 1125 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| 2-oxoglutarate metabolic process | 1.5158E-7 | 3 | 2 | 2 | 6292 |
| acetyl-CoA catabolic process | 1.5894E-5 | 3 | 15 | 2 | 6292 |
| tricarboxylic acid cycle | 1.5894E-5 | 3 | 15 | 2 | 6292 |
| acetyl-CoA metabolic process | 2.8745E-5 | 3 | 20 | 2 | 6292 |
| coenzyme catabolic process | 2.8745E-5 | 3 | 20 | 2 | 6292 |
| cofactor catabolic process | 3.4941E-5 | 3 | 22 | 2 | 6292 |
| dicarboxylic acid metabolic process | 6.5742E-5 | 3 | 30 | 2 | 6292 |
| aerobic respiration | 5.114E-4 | 3 | 83 | 2 | 6292 |
| cellular respiration | 6.9865E-4 | 3 | 97 | 2 | 6292 |
| coenzyme metabolic process | 1.0687E-3 | 3 | 120 | 2 | 6292 |
| energy derivation by oxidation of organic compounds | 1.6453E-3 | 3 | 149 | 2 | 6292 |
| cofactor metabolic process | 1.757E-3 | 3 | 154 | 2 | 6292 |
| generation of precursor metabolites and energy | 2.8085E-3 | 3 | 195 | 2 | 6292 |
| organic acid metabolic process | 8.0851E-3 | 3 | 333 | 2 | 6292 |
| oxoacid metabolic process | 8.0851E-3 | 3 | 333 | 2 | 6292 |
| carboxylic acid metabolic process | 8.0851E-3 | 3 | 333 | 2 | 6292 |
| cellular ketone metabolic process | 8.7172E-3 | 3 | 346 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| dihydrolipoyllysine-residue succinyltransferase activity | 4.768E-4 | 3 | 1 | 1 | 6292 |
| S-succinyltransferase activity | 4.768E-4 | 3 | 1 | 1 | 6292 |
| succinyltransferase activity | 9.5344E-4 | 3 | 2 | 1 | 6292 |
| oxoglutarate dehydrogenase (succinyl-transferring) activity | 9.5344E-4 | 3 | 2 | 1 | 6292 |
| oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | 2.3825E-3 | 3 | 5 | 1 | 6292 |
| S-acyltransferase activity | 6.1865E-3 | 3 | 13 | 1 | 6292 |