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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleoid 8.248E-3 2 26 1 6292
mitochondrial nucleoid 8.248E-3 2 26 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cellular amino acid biosynthetic process 3.2544E-4 2 114 2 6292
amine biosynthetic process 3.7294E-4 2 122 2 6292
organic acid biosynthetic process 4.846E-4 2 139 2 6292
carboxylic acid biosynthetic process 4.846E-4 2 139 2 6292
cellular amino acid metabolic process 9.9543E-4 2 199 2 6292
cellular amine metabolic process 1.2395E-3 2 222 2 6292
amine metabolic process 1.4856E-3 2 243 2 6292
cellular amino acid and derivative metabolic process 1.4856E-3 2 243 2 6292
cellular nitrogen compound biosynthetic process 1.5351E-3 2 247 2 6292
small molecule biosynthetic process 2.42E-3 2 310 2 6292
organic acid metabolic process 2.793E-3 2 333 2 6292
oxoacid metabolic process 2.793E-3 2 333 2 6292
carboxylic acid metabolic process 2.793E-3 2 333 2 6292
cellular ketone metabolic process 3.0157E-3 2 346 2 6292
branched chain family amino acid biosynthetic process 4.7627E-3 2 15 1 6292
aromatic amino acid family biosynthetic process 5.7138E-3 2 18 1 6292
chorismate metabolic process 5.7138E-3 2 18 1 6292
branched chain family amino acid metabolic process 5.7138E-3 2 18 1 6292
aromatic amino acid family metabolic process 7.6148E-3 2 24 1 6292
dicarboxylic acid metabolic process 9.5139E-3 2 30 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ketol-acid reductoisomerase activity 3.1786E-4 2 1 1 6292
3-deoxy-7-phosphoheptulonate synthase activity 6.3568E-4 2 2 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle