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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

transcription factor complex 1.2283E-3 5 71 2 6292
organelle lumen 9.7686E-3 5 660 3 6292
intracellular organelle lumen 9.7686E-3 5 660 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

transcription from mitochondrial promoter 2.3825E-3 5 3 1 6292
transcription, DNA-dependent 4.4943E-3 5 503 3 6292
RNA biosynthetic process 4.6241E-3 5 508 3 6292
mitochondrial fission 4.7604E-3 5 6 1 6292
mitochondrion organization 5.815E-3 5 156 2 6292
transcription 5.8697E-3 5 552 3 6292
transcription initiation from RNA polymerase III promoter 8.7135E-3 5 11 1 6292
cell part morphogenesis 9.5026E-3 5 12 1 6292
mitochondrion morphogenesis 9.5026E-3 5 12 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

sterol 24-C-methyltransferase activity 7.9466E-4 5 1 1 6292
S-adenosylmethionine-dependent methyltransferase activity 1.0942E-3 5 67 2 6292
methyltransferase activity 2.2359E-3 5 96 2 6292
transferase activity, transferring one-carbon groups 2.3763E-3 5 99 2 6292
C-methyltransferase activity 2.3825E-3 5 3 1 6292
RNA polymerase III transcription factor activity 7.9239E-3 5 10 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle