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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytoplasmic mRNA processing body 1.0446E-10 5 15 4 6292
ribonucleoprotein complex 2.06E-4 5 514 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mRNA catabolic process 1.3697E-10 5 69 5 6292
RNA catabolic process 2.93E-10 5 80 5 6292
nuclear-transcribed mRNA catabolic process 5.6325E-9 5 38 4 6292
deadenylation-dependent decapping of nuclear-transcribed mRNA 3.9687E-8 5 11 3 6292
mRNA metabolic process 4.2473E-8 5 213 5 6292
cellular macromolecule catabolic process 1.2779E-7 5 265 5 6292
macromolecule catabolic process 2.1559E-7 5 294 5 6292
nuclear-transcribed mRNA catabolic process, deadenylation-independent decay 5.0527E-7 5 2 2 6292
deadenylation-independent decapping of nuclear-transcribed mRNA 5.0527E-7 5 2 2 6292
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 7.0086E-7 5 27 3 6292
cellular catabolic process 1.2203E-6 5 415 5 6292
catabolic process 2.9879E-6 5 496 5 6292
RNA metabolic process 7.942E-5 5 954 5 6292
nucleic acid metabolic process 5.7208E-4 5 1415 5 6292
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 9.5045E-4 5 1566 5 6292
cellular nitrogen compound metabolic process 1.7545E-3 5 1770 5 6292
nitrogen compound metabolic process 1.8612E-3 5 1791 5 6292
cellular macromolecule metabolic process 6.2991E-3 5 2285 5 6292
macromolecule metabolic process 7.2329E-3 5 2349 5 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

m7G(5')pppN diphosphatase activity 5.0479E-6 5 5 2 6292
mRNA binding 2.9749E-4 5 35 2 6292
RNA binding 1.8021E-3 5 367 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle