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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic small ribosomal subunit 1.0615E-4 3 38 2 6292
small ribosomal subunit 3.9536E-4 3 73 2 6292
cytosolic ribosome 7.5745E-4 3 101 2 6292
cytosolic part 1.1046E-3 3 122 2 6292
ribosomal subunit 2.4758E-3 3 183 2 6292
cytosol 5.9093E-3 3 284 2 6292
ribosome 6.1581E-3 3 290 2 6292
90S preribosome 8.0849E-3 3 17 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosomal small subunit biogenesis 4.9138E-5 3 26 2 6292
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 6.1865E-3 3 13 1 6292
ribosomal small subunit assembly 6.6614E-3 3 14 1 6292
ribosome biogenesis 8.7172E-3 3 346 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 3.3148E-3 3 212 2 6292
structural molecule activity 8.374E-3 3 339 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle