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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Arp2/3 protein complex 1.2953E-23 7 7 7 6292
actin cytoskeleton 6.3932E-14 7 85 7 6292
cytoskeletal part 3.065E-11 7 201 7 6292
cytoskeleton 5.1104E-11 7 216 7 6292
non-membrane-bounded organelle 1.8755E-6 7 959 7 6292
intracellular non-membrane-bounded organelle 1.8755E-6 7 959 7 6292
protein complex 6.1975E-6 7 1137 7 6292
macromolecular complex 7.9244E-5 7 1635 7 6292
organelle part 8.2061E-4 7 2282 7 6292
intracellular organelle part 8.2061E-4 7 2282 7 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mitochondrion inheritance 2.0216E-17 7 29 7 6292
mitochondrion distribution 2.0216E-17 7 29 7 6292
mitochondrion localization 2.6369E-17 7 30 7 6292
organelle inheritance 4.9635E-16 7 44 7 6292
organelle localization 6.3932E-14 7 85 7 6292
actin cytoskeleton organization 5.0024E-13 7 113 7 6292
actin filament-based process 6.4238E-13 7 117 7 6292
mitochondrion organization 5.0409E-12 7 156 7 6292
cytoskeleton organization 8.2292E-11 7 231 7 6292
cellular localization 1.1302E-7 7 643 7 6292
actin filament organization 4.263E-7 7 68 4 6292
localization 3.7883E-6 7 1060 7 6292
organelle organization 5.8249E-6 7 1127 7 6292
cellular component organization 6.2893E-5 7 1582 7 6292
actin cortical patch assembly 9.5944E-5 7 14 2 6292
cortical actin cytoskeleton organization 1.1065E-4 7 15 2 6292
cortical cytoskeleton organization 1.1065E-4 7 15 2 6292
actin nucleation 3.3344E-3 7 3 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural molecule activity 1.2424E-9 7 339 7 6292
structural constituent of cytoskeleton 1.5417E-7 7 53 4 6292
actin binding 1.1122E-6 7 21 3 6292
cytoskeletal protein binding 2.6695E-5 7 59 3 6292
ATP binding 2.8946E-4 7 24 2 6292
adenyl ribonucleotide binding 3.1446E-4 7 25 2 6292
adenyl nucleotide binding 4.5476E-4 7 30 2 6292
purine nucleoside binding 4.8586E-4 7 31 2 6292
nucleoside binding 5.1798E-4 7 32 2 6292
ribonucleotide binding 8.5225E-4 7 41 2 6292
purine ribonucleotide binding 8.5225E-4 7 41 2 6292
purine nucleotide binding 1.3701E-3 7 52 2 6292
nucleotide binding 1.7614E-3 7 59 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle