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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

late endosome 3.4941E-5 3 22 2 6292
endosome 6.561E-4 3 94 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

vesicle-mediated transport 1.5647E-4 3 340 3 6292
protein targeting to vacuole 3.5308E-4 3 69 2 6292
endocytosis 5.7496E-4 3 88 2 6292
membrane invagination 6.561E-4 3 94 2 6292
vacuolar transport 9.8171E-4 3 115 2 6292
membrane organization 2.8949E-3 3 198 2 6292
cellular membrane organization 2.8949E-3 3 198 2 6292
transport 3.9684E-3 3 997 3 6292
protein targeting 4.0648E-3 3 235 2 6292
establishment of localization 4.1014E-3 3 1008 3 6292
localization 4.7701E-3 3 1060 3 6292
intracellular protein transport 4.7773E-3 3 255 2 6292
protein transport 5.3092E-3 3 269 2 6292
establishment of protein localization 5.3875E-3 3 271 2 6292
cellular protein localization 5.5058E-3 3 274 2 6292
cellular macromolecule localization 5.9093E-3 3 284 2 6292
protein localization 6.714E-3 3 303 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

GTPase activity 2.7566E-4 3 61 2 6292
Rab GDP-dissociation inhibitor activity 4.768E-4 3 1 1 6292
GDP-dissociation inhibitor activity 9.5344E-4 3 2 1 6292
nucleoside-triphosphatase activity 7.8952E-3 3 329 2 6292
hydrolase activity, acting on acid anhydrides 9.067E-3 3 353 2 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 9.067E-3 3 353 2 6292
pyrophosphatase activity 9.067E-3 3 353 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle