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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

proteasome core complex, alpha-subunit complex 3.3344E-3 3 7 1 6292
proteasome core complex 7.6106E-3 3 16 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

UDP-N-acetylglucosamine metabolic process 9.5344E-4 3 2 1 6292
UDP-N-acetylglucosamine biosynthetic process 9.5344E-4 3 2 1 6292
glucosamine biosynthetic process 1.4299E-3 3 3 1 6292
amino sugar metabolic process 1.4299E-3 3 3 1 6292
glucosamine metabolic process 1.4299E-3 3 3 1 6292
N-acetylglucosamine metabolic process 1.4299E-3 3 3 1 6292
N-acetylglucosamine biosynthetic process 1.4299E-3 3 3 1 6292
amino sugar biosynthetic process 1.4299E-3 3 3 1 6292
mitochondrial fission 2.8585E-3 3 6 1 6292
nucleotide-sugar metabolic process 3.3344E-3 3 7 1 6292
anatomical structure morphogenesis 4.8516E-3 3 257 2 6292
anatomical structure development 4.9641E-3 3 260 2 6292
cellular developmental process 5.5854E-3 3 276 2 6292
cell part morphogenesis 5.7116E-3 3 12 1 6292
mitochondrion morphogenesis 5.7116E-3 3 12 1 6292
microtubule-based movement 7.6106E-3 3 16 1 6292
microtubule-based transport 7.6106E-3 3 16 1 6292
nuclear migration along microtubule 7.6106E-3 3 16 1 6292
developmental process 7.9899E-3 3 331 2 6292
cytoskeleton-dependent intracellular transport 8.5592E-3 3 18 1 6292
nuclear migration 9.5071E-3 3 20 1 6292
nucleus localization 9.5071E-3 3 20 1 6292
establishment of nucleus localization 9.5071E-3 3 20 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

glucosamine 6-phosphate N-acetyltransferase activity 4.768E-4 3 1 1 6292
tubulin binding 9.5071E-3 3 20 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle