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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic large ribosomal subunit 8.1348E-6 5 60 3 6292
ribosome 2.1316E-5 5 290 4 6292
cytosolic ribosome 3.9227E-5 5 101 3 6292
large ribosomal subunit 5.0691E-5 5 110 3 6292
cytosolic part 6.9145E-5 5 122 3 6292
ribonucleoprotein complex 2.06E-4 5 514 4 6292
ribosomal subunit 2.3185E-4 5 183 3 6292
cytosol 8.504E-4 5 284 3 6292
non-membrane-bounded organelle 2.3579E-3 5 959 4 6292
intracellular non-membrane-bounded organelle 2.3579E-3 5 959 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 1.9341E-3 5 376 3 6292
cellular macromolecule biosynthetic process 5.3579E-3 5 1187 4 6292
macromolecule biosynthetic process 5.3925E-3 5 1189 4 6292
loss of chromatin silencing involved in replicative cell aging 7.1338E-3 5 9 1 6292
gene expression 7.2106E-3 5 1283 4 6292
progressive alteration of chromatin involved in replicative cell aging 7.9239E-3 5 10 1 6292
loss of chromatin silencing 7.9239E-3 5 10 1 6292
progressive alteration of chromatin involved in cell aging 8.7135E-3 5 11 1 6292
positive regulation of gene expression, epigenetic 8.7135E-3 5 11 1 6292
regulation of gene silencing 8.7135E-3 5 11 1 6292
negative regulation of gene silencing 8.7135E-3 5 11 1 6292
regulation of chromatin silencing 8.7135E-3 5 11 1 6292
negative regulation of chromatin silencing 8.7135E-3 5 11 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 3.5873E-4 5 212 3 6292
structural molecule activity 1.4293E-3 5 339 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle