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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytoplasmic mRNA processing body 1.0965E-8 3 15 3 6292
ribonucleoprotein complex 5.4224E-4 3 514 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear-transcribed mRNA catabolic process, deadenylation-independent decay 1.5158E-7 3 2 2 6292
deadenylation-independent decapping of nuclear-transcribed mRNA 1.5158E-7 3 2 2 6292
nuclear-transcribed mRNA catabolic process 2.033E-7 3 38 3 6292
mRNA catabolic process 1.2626E-6 3 69 3 6292
RNA catabolic process 1.9799E-6 3 80 3 6292
deadenylation-dependent decapping of nuclear-transcribed mRNA 8.329E-6 3 11 2 6292
mRNA metabolic process 3.8268E-5 3 213 3 6292
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 5.3064E-5 3 27 2 6292
cellular macromolecule catabolic process 7.39E-5 3 265 3 6292
macromolecule catabolic process 1.0103E-4 3 294 3 6292
cellular catabolic process 2.85E-4 3 415 3 6292
catabolic process 4.8714E-4 3 496 3 6292
RNA metabolic process 3.4763E-3 3 954 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

m7G(5')pppN diphosphatase activity 1.5153E-6 3 5 2 6292
mRNA binding 8.9875E-5 3 35 2 6292
hydrolase activity, acting on acid anhydrides 9.067E-3 3 353 2 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 9.067E-3 3 353 2 6292
pyrophosphatase activity 9.067E-3 3 353 2 6292
RNA binding 9.7865E-3 3 367 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle