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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 9 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

organellar large ribosomal subunit 5.9161E-20 9 50 9 6292
mitochondrial large ribosomal subunit 5.9161E-20 9 50 9 6292
organellar ribosome 1.6677E-17 9 90 9 6292
mitochondrial ribosome 1.6677E-17 9 90 9 6292
large ribosomal subunit 1.0964E-16 9 110 9 6292
mitochondrial matrix 8.5645E-15 9 176 9 6292
mitochondrial lumen 8.5645E-15 9 176 9 6292
ribosomal subunit 1.2265E-14 9 183 9 6292
ribosome 8.3277E-13 9 290 9 6292
mitochondrial part 7.4219E-11 9 475 9 6292
ribonucleoprotein complex 1.5187E-10 9 514 9 6292
organelle lumen 1.4638E-9 9 660 9 6292
intracellular organelle lumen 1.4638E-9 9 660 9 6292
membrane-enclosed lumen 2.4937E-9 9 700 9 6292
non-membrane-bounded organelle 4.2994E-8 9 959 9 6292
intracellular non-membrane-bounded organelle 4.2994E-8 9 959 9 6292
mitochondrion 1.819E-7 9 1125 9 6292
macromolecular complex 5.3146E-6 9 1635 9 6292
organelle part 1.0749E-4 9 2282 9 6292
intracellular organelle part 1.0749E-4 9 2282 9 6292
cytoplasmic part 2.2924E-4 9 2482 9 6292
cytoplasm 5.7975E-3 9 3552 9 6292
membrane-bounded organelle 9.9391E-3 9 3771 9 6292
intracellular membrane-bounded organelle 9.9391E-3 9 3771 9 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 8.8752E-12 9 376 9 6292
cellular protein metabolic process 1.1963E-7 9 1074 9 6292
protein metabolic process 1.9861E-7 9 1136 9 6292
cellular macromolecule biosynthetic process 2.9528E-7 9 1187 9 6292
macromolecule biosynthetic process 2.9981E-7 9 1189 9 6292
gene expression 5.9596E-7 9 1283 9 6292
cellular biosynthetic process 3.6225E-6 9 1567 9 6292
biosynthetic process 4.4215E-6 9 1602 9 6292
cellular macromolecule metabolic process 1.0877E-4 9 2285 9 6292
macromolecule metabolic process 1.3953E-4 9 2349 9 6292
primary metabolic process 9.2081E-4 9 2896 9 6292
mitochondrial genome maintenance 9.9648E-4 9 34 2 6292
cellular metabolic process 1.3966E-3 9 3033 9 6292
ribosomal large subunit assembly 1.449E-3 9 41 2 6292
metabolic process 2.004E-3 9 3157 9 6292
ribosomal subunit assembly 2.5969E-3 9 55 2 6292
ribosome assembly 3.502E-3 9 64 2 6292
ribosomal large subunit biogenesis 3.6105E-3 9 65 2 6292
organelle assembly 4.0601E-3 9 69 2 6292
ribonucleoprotein complex assembly 7.1217E-3 9 92 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 4.7387E-14 9 212 9 6292
structural molecule activity 3.4568E-12 9 339 9 6292
peptidyltransferase activity 4.2857E-3 9 3 1 6292
transferase activity, transferring amino-acyl groups 7.1338E-3 9 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle