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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic large ribosomal subunit 3.7105E-8 5 60 4 6292
cytosolic ribosome 3.0904E-7 5 101 4 6292
large ribosomal subunit 4.3647E-7 5 110 4 6292
cytosolic part 6.6303E-7 5 122 4 6292
ribosomal subunit 3.3861E-6 5 183 4 6292
cytosol 1.9613E-5 5 284 4 6292
ribosome 2.1316E-5 5 290 4 6292
non-membrane-bounded organelle 8.1528E-5 5 959 5 6292
intracellular non-membrane-bounded organelle 8.1528E-5 5 959 5 6292
ribonucleoprotein complex 2.06E-4 5 514 4 6292
organelle part 6.2578E-3 5 2282 5 6292
intracellular organelle part 6.2578E-3 5 2282 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 5.9837E-5 5 376 4 6292
cellular protein metabolic process 3.6498E-3 5 1074 4 6292
protein metabolic process 4.528E-3 5 1136 4 6292
cellular macromolecule biosynthetic process 5.3579E-3 5 1187 4 6292
macromolecule biosynthetic process 5.3925E-3 5 1189 4 6292
gene expression 7.2106E-3 5 1283 4 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RNA binding 6.5795E-7 5 367 5 6292
structural constituent of ribosome 6.1033E-6 5 212 4 6292
nucleic acid binding 1.3109E-5 5 666 5 6292
structural molecule activity 3.9664E-5 5 339 4 6292
binding 3.6564E-4 5 1294 5 6292
5S rRNA binding 1.5888E-3 5 2 1 6292
rRNA primary transcript binding 3.9682E-3 5 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle