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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cell cortex 1.6256E-10 7 109 6 6292
cell cortex part 1.5269E-8 7 96 5 6292
actin cortical patch 5.3564E-8 7 41 4 6292
cortical actin cytoskeleton 1.4259E-7 7 52 4 6292
cortical cytoskeleton 1.4259E-7 7 52 4 6292
cytoskeleton 9.0439E-7 7 216 5 6292
actin cytoskeleton 1.053E-6 7 85 4 6292
cytoskeletal part 3.2812E-5 7 201 4 6292
non-membrane-bounded organelle 1.3072E-3 7 959 5 6292
intracellular non-membrane-bounded organelle 1.3072E-3 7 959 5 6292
cytoplasmic part 1.4786E-3 7 2482 7 6292
eisosome 2.224E-3 7 2 1 6292
membrane fraction 4.1444E-3 7 91 2 6292
insoluble fraction 4.1444E-3 7 91 2 6292
cell fraction 8.188E-3 7 129 2 6292
membrane raft 8.8705E-3 7 8 1 6292
TORC2 complex 9.9746E-3 7 9 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

endocytosis 8.8864E-5 7 88 3 6292
membrane invagination 1.0824E-4 7 94 3 6292
actin cytoskeleton organization 1.8733E-4 7 113 3 6292
actin filament-based process 2.0773E-4 7 117 3 6292
cellular membrane organization 9.7839E-4 7 198 3 6292
membrane organization 9.7839E-4 7 198 3 6292
actin cortical patch distribution 1.1125E-3 7 1 1 6292
cellular component organization 1.3786E-3 7 1582 6 6292
cytoskeleton organization 1.5322E-3 7 231 3 6292
vesicle-mediated transport 4.6509E-3 7 340 3 6292
response to abiotic stimulus 6.7733E-3 7 117 2 6292
phosphoinositide dephosphorylation 7.7654E-3 7 7 1 6292
phospholipid dephosphorylation 7.7654E-3 7 7 1 6292
establishment or maintenance of actin cytoskeleton polarity 9.9746E-3 7 9 1 6292
establishment or maintenance of cytoskeleton polarity 9.9746E-3 7 9 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein binding, bridging 1.9969E-4 7 20 2 6292
cytoskeletal protein binding 1.7614E-3 7 59 2 6292
protein binding 2.4409E-3 7 612 4 6292
inositol-polyphosphate 5-phosphatase activity 3.3344E-3 7 3 1 6292
inositol trisphosphate phosphatase activity 3.3344E-3 7 3 1 6292
phosphoinositide 5-phosphatase activity 4.4437E-3 7 4 1 6292
phosphatidylinositol bisphosphate phosphatase activity 4.4437E-3 7 4 1 6292
phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity 4.4437E-3 7 4 1 6292
binding 5.2851E-3 7 1294 5 6292
inositol or phosphatidylinositol phosphatase activity 9.9746E-3 7 9 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle