YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 12 proteins

Complex Member Proteins

Protein

GO Cellular Component GO Biological Process GO Molecular Function
RPL11B
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • ribosomal large subunit assembly
  • translation
  • structural constituent of ribosome
  • RPL13B
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • telomere maintenance
  • translation
  • structural constituent of ribosome
  • RPL16A
  • ribonucleoprotein complex
  • cytoplasm
  • large ribosomal subunit
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • translation
  • RNA binding
  • structural constituent of ribosome
  • RPL16B
  • ribonucleoprotein complex
  • cytoplasm
  • large ribosomal subunit
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • translation
  • RNA binding
  • structural constituent of ribosome
  • RPL17A
  • cytoplasm
  • translation
  • structural constituent of ribosome
  • RPL17B
  • ribonucleoprotein complex
  • cytoplasm
  • large ribosomal subunit
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • translation
  • structural constituent of ribosome
  • RPL1A, RPL1B
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • regulation of translation
  • RNA processing
  • translation
  • RNA binding
  • structural constituent of ribosome
  • RPL2A, RPL2B
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • regulation of translation
  • response to drug
  • translation
  • RNA binding
  • structural constituent of ribosome
  • rRNA binding
  • RPL36B
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • translation
  • RNA binding
  • structural constituent of ribosome
  • RPL6A
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • ribosomal large subunit assembly
  • translation
  • RNA binding
  • structural constituent of ribosome
  • RPS14A
  • small nucleolar ribonucleoprotein complex
  • maturation of SSU-rRNA
  • telomere maintenance
  • ribosomal small subunit assembly
  • translation
  • RNA binding
  • structural constituent of ribosome
  • RPS17B
  • ribonucleoprotein complex
  • cytosolic small ribosomal subunit
  • cytoplasm
  • ribosome
  • intracellular
  • telomere maintenance
  • ribosomal small subunit assembly
  • translation
  • structural constituent of ribosome
  • Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    cytosolic ribosome 4.6409E-17 12 101 10 6292
    cytosolic large ribosomal subunit 7.5125E-17 12 60 9 6292
    cytosolic part 3.3087E-16 12 122 10 6292
    ribosomal subunit 2.1309E-14 12 183 10 6292
    large ribosomal subunit 2.309E-14 12 110 9 6292
    cytosol 1.8332E-12 12 284 10 6292
    ribosome 2.263E-12 12 290 10 6292
    ribonucleoprotein complex 1.0889E-11 12 514 11 6292
    non-membrane-bounded organelle 3.1935E-7 12 959 10 6292
    intracellular non-membrane-bounded organelle 3.1935E-7 12 959 10 6292
    macromolecular complex 3.2574E-6 12 1635 11 6292
    organelle part 1.1585E-3 12 2282 10 6292
    intracellular organelle part 1.1585E-3 12 2282 10 6292
    cytoplasmic part 2.4627E-3 12 2482 10 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    translation 1.7552E-15 12 376 12 6292
    cellular protein metabolic process 5.8125E-10 12 1074 12 6292
    protein metabolic process 1.1437E-9 12 1136 12 6292
    cellular macromolecule biosynthetic process 1.9421E-9 12 1187 12 6292
    macromolecule biosynthetic process 1.9819E-9 12 1189 12 6292
    gene expression 4.9591E-9 12 1283 12 6292
    cellular biosynthetic process 5.5155E-8 12 1567 12 6292
    biosynthetic process 7.1963E-8 12 1602 12 6292
    ribosomal subunit assembly 2.4564E-6 12 55 4 6292
    ribosome assembly 4.5342E-6 12 64 4 6292
    cellular macromolecule metabolic process 5.1661E-6 12 2285 12 6292
    organelle assembly 6.1378E-6 12 69 4 6292
    macromolecule metabolic process 7.2022E-6 12 2349 12 6292
    ribonucleoprotein complex assembly 1.9376E-5 12 92 4 6292
    primary metabolic process 8.9282E-5 12 2896 12 6292
    cellular metabolic process 1.5563E-4 12 3033 12 6292
    metabolic process 2.5194E-4 12 3157 12 6292
    cellular macromolecular complex assembly 2.7951E-4 12 182 4 6292
    ribosomal small subunit assembly 2.9963E-4 12 14 2 6292
    ribosomal small subunit biogenesis 1.0566E-3 12 26 2 6292
    cellular macromolecular complex subunit organization 1.0688E-3 12 259 4 6292
    macromolecular complex assembly 1.45E-3 12 281 4 6292
    ribosomal large subunit assembly 2.6238E-3 12 41 2 6292
    ribosome biogenesis 3.1264E-3 12 346 4 6292
    macromolecular complex subunit organization 3.5046E-3 12 357 4 6292
    ribonucleoprotein complex biogenesis 4.1497E-3 12 374 4 6292
    cellular component assembly 4.6084E-3 12 385 4 6292
    regulation of translation 5.0209E-3 12 57 2 6292
    posttranscriptional regulation of gene expression 5.7327E-3 12 61 2 6292
    ribosomal large subunit biogenesis 6.4883E-3 12 65 2 6292
    regulation of cellular protein metabolic process 7.0833E-3 12 68 2 6292
    regulation of protein metabolic process 8.3454E-3 12 74 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    structural constituent of ribosome 1.5755E-18 12 212 12 6292
    structural molecule activity 4.9655E-16 12 339 12 6292
    RNA binding 1.333E-6 12 367 7 6292
    nucleic acid binding 7.0946E-5 12 666 7 6292
    binding 4.5673E-3 12 1294 7 6292

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle