| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.084] [SVM Score: 0.439040606386] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| ADH3 |
|
|
|
| PAN5 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| soluble fraction | 5.2295E-5 | 2 | 46 | 2 | 6292 |
| cell fraction | 4.1715E-4 | 2 | 129 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| coenzyme metabolic process | 3.6076E-4 | 2 | 120 | 2 | 6292 |
| cofactor metabolic process | 5.9526E-4 | 2 | 154 | 2 | 6292 |
| pantothenate biosynthetic process | 2.859E-3 | 2 | 9 | 1 | 6292 |
| pantothenate metabolic process | 2.859E-3 | 2 | 9 | 1 | 6292 |
| NADH oxidation | 3.811E-3 | 2 | 12 | 1 | 6292 |
| NADH metabolic process | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| fermentation | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| group transfer coenzyme metabolic process | 7.9314E-3 | 2 | 25 | 1 | 6292 |
| NAD metabolic process | 7.9314E-3 | 2 | 25 | 1 | 6292 |
| cellular amino acid derivative biosynthetic process | 8.8811E-3 | 2 | 28 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.3278E-4 | 2 | 73 | 2 | 6292 |
| oxidoreductase activity, acting on CH-OH group of donors | 1.6371E-4 | 2 | 81 | 2 | 6292 |
| 2-dehydropantoate 2-reductase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| oxidoreductase activity | 1.9877E-3 | 2 | 281 | 2 | 6292 |
| alcohol dehydrogenase (NAD) activity | 2.224E-3 | 2 | 7 | 1 | 6292 |