| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.084] [SVM Score: 0.495547979755] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| BFA1 |
|
|
|
| GIC1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
| cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
| actin cap | 3.811E-3 | 2 | 12 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| regulation of exit from mitosis | 1.5158E-5 | 2 | 25 | 2 | 6292 |
| exit from mitosis | 1.5158E-5 | 2 | 25 | 2 | 6292 |
| regulation of mitotic cell cycle | 1.2556E-4 | 2 | 71 | 2 | 6292 |
| regulation of cell cycle process | 1.6371E-4 | 2 | 81 | 2 | 6292 |
| M phase of mitotic cell cycle | 4.1068E-4 | 2 | 128 | 2 | 6292 |
| regulation of cell cycle | 4.3024E-4 | 2 | 131 | 2 | 6292 |
| signal transduction | 1.1516E-3 | 2 | 214 | 2 | 6292 |
| signal transmission | 1.1841E-3 | 2 | 217 | 2 | 6292 |
| signaling process | 1.1841E-3 | 2 | 217 | 2 | 6292 |
| mitotic cell cycle spindle orientation checkpoint | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| signaling | 1.598E-3 | 2 | 252 | 2 | 6292 |
| mitotic cell cycle | 1.6363E-3 | 2 | 255 | 2 | 6292 |
| M phase | 2.1762E-3 | 2 | 294 | 2 | 6292 |
| cell cycle phase | 3.5621E-3 | 2 | 376 | 2 | 6292 |
| cell cycle process | 6.0534E-3 | 2 | 490 | 2 | 6292 |
| Rho protein signal transduction | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| cell cycle | 6.95E-3 | 2 | 525 | 2 | 6292 |
| mitotic cell cycle spindle checkpoint | 7.9314E-3 | 2 | 25 | 1 | 6292 |
| spindle checkpoint | 7.9314E-3 | 2 | 25 | 1 | 6292 |
| mitotic cell cycle checkpoint | 8.8811E-3 | 2 | 28 | 1 | 6292 |
| axial cellular bud site selection | 9.1975E-3 | 2 | 29 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| GTPase regulator activity | 1.7614E-4 | 2 | 84 | 2 | 6292 |
| nucleoside-triphosphatase regulator activity | 2.256E-4 | 2 | 95 | 2 | 6292 |
| enzyme regulator activity | 1.0773E-3 | 2 | 207 | 2 | 6292 |