| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.084] [SVM Score: 0.578428170412] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mitochondrial matrix | 7.7811E-4 | 2 | 176 | 2 | 6292 |
| mitochondrial lumen | 7.7811E-4 | 2 | 176 | 2 | 6292 |
| cytosol | 2.0305E-3 | 2 | 284 | 2 | 6292 |
| mitochondrial part | 5.6881E-3 | 2 | 475 | 2 | 6292 |
| nucleoid | 8.248E-3 | 2 | 26 | 1 | 6292 |
| mitochondrial nucleoid | 8.248E-3 | 2 | 26 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| hydro-lyase activity | 1.7735E-5 | 2 | 27 | 2 | 6292 |
| carbon-oxygen lyase activity | 3.1832E-5 | 2 | 36 | 2 | 6292 |
| lyase activity | 1.9342E-4 | 2 | 88 | 2 | 6292 |
| fumarate hydratase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| aconitate hydratase activity | 6.3568E-4 | 2 | 2 | 1 | 6292 |