| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.621554725979] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| CLF1 |
|
|
|
| SLD3 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| chromatin | 1.4784E-4 | 2 | 77 | 2 | 6292 |
| chromosomal part | 1.413E-3 | 2 | 237 | 2 | 6292 |
| chromosome | 1.8898E-3 | 2 | 274 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| DNA replication | 3.791E-4 | 2 | 123 | 2 | 6292 |
| cis assembly of pre-catalytic spliceosome | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| nuclear mRNA cis splicing, via spliceosome | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| DNA unwinding involved in replication | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| spliceosome assembly | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| DNA geometric change | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| DNA duplex unwinding | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| DNA metabolic process | 8.631E-3 | 2 | 585 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |