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Protein Overview: btb3

General Information:
Name(s) found: btb3 / SPAC13D6.04c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • BTB/POZ domain protein Btb3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 523 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISSLink to PubMed article]
    ubiquitin ligase complex [IPILink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: proteasomal ubiquitin-dependent protein catabolic process [ISSLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQDQNTGT THVELQGGEN SKKLFSKYDL WSKAMDEKKL SSSLFTVNDT QEFLELCEAC  60
   61 RRGDLEVVKS LVENYNTPIN QVDQFDYSPL VLASLCGHEP VVKFLLENGA LCERDTFQGE 120
  121 RCLYGALNDN IRRMLLSYDI TKAIDESQPY ASHITSLLSN SALHFTTDIV FAGQYGRVFA 180
  181 HKFYLAARSS YFKSKFSKLG PSEHEIEVKH FAKEFESILR YLYLDTNAVF TKQYNNALLS 240
  241 IGKKFQLNDF IALYEKDREQ LHSRDWKKIQ LAKTQNDLGE FLDYIISNYK VPIESLNQPS 300
  301 DQYSFHDAYL QSYTHRYPVH RAIMCRCEYF LDMLAGPFLE SNQELPVLSL PFSSSVVEIV 360
  361 LKFLYTDKTD IAPELALDVV YVADMLSLDK DRSLKSLASI VITKQEEPID SIYDILRTAW 420
  421 DTSTPRLEQY ASEYMANHLE HLIDDPEFCE LVKESADRIL QRQETDTIEL IDDIRYFLSK 480
  481 RFGIYHEDLC IDGVVDTLTP YESEYNQKME MIDDLLDKLE LQA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..263] PSI-BLAST 20.522879 Complex between protein ser/thr phosphatase-1 (delta) and the myosin phosphatase targeting subunit 1 (MYPT1)
    2 View Details [264..422] FFAS03 5.6 No description for 2nn2A was found.
    3 View Details [423..523] PSI-BLAST 4.39794 No description for 2eqxA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ubiquitin-protein ligase activity
    		•  5.51408693063973 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  5.39570733229097 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  4.48803484579282 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  3.45376527185139 bayes_pls_golite062009
  • binding
    		•  2.01632408655207 bayes_pls_golite062009
  • ligase activity
    		•  1.70305542877215 bayes_pls_golite062009
  • protein binding
    		•  0.952291974396942 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.280340492381105 bayes_pls_golite062009
  • hydrolase activity
    		•  0.267841970986288 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.200037902200316 bayes_pls_golite062009
  • structural molecule activity
    		•  0.056217988195574 bayes_pls_golite062009
  • DNA binding
    		•  0.0016834194928852 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle