YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: TWIH_ARATH

General Information:
Name(s) found: TWIH_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
SHOW ALL
  • Twinkle homolog protein, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=At1g30680 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 709 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA replication [IEA]
    DNA metabolic process [IEA]
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    DNA helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFLLRLPQI HFRKLSCSMS VLMGSKQFLE FCLLPSFASY PSSPSYSSSR QVSSVSRRFR  60
   61 PVLASRPVSK NSPYYQRTNG LSSYNSIPRV PTPVDTEVEA DKRVVLSRLV TLRRKLAEQG 120
  121 VDAENCPPGQ HSGLICPTCE GGNSGEKSLS LFIAPDGSSA TWNCFRGKCG LKGGVRADGG 180
  181 LASADPIEKV ERKITVEGIE LEPLCDEIQD YFAARAISRK TLERNRVMQK RIGDEIVIAF 240
  241 TYWQRGELVS CKYRSLTKMF FQERKTRRIL YGLDDIEKTS EVIIVEGEID KLAMEEAGFL 300
  301 NCVSVPDGAP AKVSSKEIPS EDKDTKYKFL WNCNDYLKKA SRIVIATDGD GPGQAMAEEI 360
  361 ARRLGKERCW RVKWPKKSED EHFKDANEVL MSKGPHLLKE AILDAEPYPI LGLFSFKDFF 420
  421 DEIDAYYDRT HGHEYGVSTG WKNLDNLYSV VPGELTVVTG IPNSGKSEWI DAMLCNLNHS 480
  481 VGWKFALCSM ENKVRDHARK LLEKHIKKPF FDADYGRSVQ RMSVEEKDEG KKWLNDTFYP 540
  541 IRCEMDSLPS IDWVLERAKA AVLRYGIRGL VIDPYNELDH QRTPRQTETE YVSQMLTKIK 600
  601 RFSQHHSCHV WFVAHPKQLQ HWDGGAPNLY DISGSAHFIN KCDNGIIVHR NRDENAGPLD 660
  661 LVQIGVRKVR NKVAGQIGDA YLCYDRTTGS YSDSPVTPGM PERRSPKRY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..194] PSI-BLAST 50.09691 Crystal Structure of the Aquifex aeolicus primase (Zinc Binding and RNA Polymerase Domains)
    2 View Details [195..709] PSI-BLAST 53.30103 The Crystal Structure of the Bifunctional Primase-Helicase of Bacteriophage T7

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.869619296732501 bayes_pls_golite062009
  • transferase activity
    		•  0.17715040725444 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.0480892970909803 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle