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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TWIH_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFLLRLPQI HFRKLSCSMS VLMGSKQFLE FCLLPSFASY PSSPSYSSSR QVSSVSRRFR  60
   61 PVLASRPVSK NSPYYQRTNG LSSYNSIPRV PTPVDTEVEA DKRVVLSRLV TLRRKLAEQG 120
  121 VDAENCPPGQ HSGLICPTCE GGNSGEKSLS LFIAPDGSSA TWNCFRGKCG LKGGVRADGG 180
  181 LASADPIEKV ERKITVEGIE LEPLCDEIQD YFAARAISRK TLERNRVMQK RIGDEIVIAF 240
  241 TYWQRGELVS CKYRSLTKMF FQERKTRRIL YGLDDIEKTS EVIIVEGEID KLAMEEAGFL 300
  301 NCVSVPDGAP AKVSSKEIPS EDKDTKYKFL WNCNDYLKKA SRIVIATDGD GPGQAMAEEI 360
  361 ARRLGKERCW RVKWPKKSED EHFKDANEVL MSKGPHLLKE AILDAEPYPI LGLFSFKDFF 420
  421 DEIDAYYDRT HGHEYGVSTG WKNLDNLYSV VPGELTVVTG IPNSGKSEWI DAMLCNLNHS 480
  481 VGWKFALCSM ENKVRDHARK LLEKHIKKPF FDADYGRSVQ RMSVEEKDEG KKWLNDTFYP 540
  541 IRCEMDSLPS IDWVLERAKA AVLRYGIRGL VIDPYNELDH QRTPRQTETE YVSQMLTKIK 600
  601 RFSQHHSCHV WFVAHPKQLQ HWDGGAPNLY DISGSAHFIN KCDNGIIVHR NRDENAGPLD 660
  661 LVQIGVRKVR NKVAGQIGDA YLCYDRTTGS YSDSPVTPGM PERRSPKRY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle