| Protein: | rpa-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 288 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rpa-2.
| Description | E-value | Query Range |
Subject Range |
|
|
280.0 | [0..1] | [287..129] |
|
Region A: Residues: [1-288] |
1 11 21 31 41 51
| | | | | |
1 MWNETVEHEN AGNGWAAGES SFMTDRKPDS KATTLGERLP VPVTISNLIE HFSAQDDKYV 60
61 VGTFRFATVL TVGIVKDISQ DGTTYTYDLC DPNNTEMEYR TLKYDNEGST FDHSSIVEGT 120
121 RVRAIGKLKG FDGNNTIMLF NITPVEDDKD FTIFELEAEA ARLFFQKNVS EKLKSVDSDG 180
181 FQGMLAPPKS RMSQTSHQSS QGSDTKERLY AQPQKVMTGA NQGDVLRERI TAVLMAVPEG 240
241 SRDEGRHVSW IAEQIQETNI SIVRKCVGEM VENGLVYTTV DEETVSAI
|
| Detection Method: |  |
| Confidence: | 72.69897 |
| Match: | 2pi2A |
| Description: | No description for 2pi2A was found. |
| Term | Confidence | Notes |
| single-stranded DNA binding | 3.59212997362902 | bayes_pls_golite062009 |
| structure-specific DNA binding | 3.53214384646348 | bayes_pls_golite062009 |
| nucleic acid binding | 3.27576062206528 | bayes_pls_golite062009 |
| binding | 2.63617204791771 | bayes_pls_golite062009 |
| DNA binding | 2.56243510083541 | bayes_pls_golite062009 |
| ribonuclease activity | 2.19009583193838 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.13063800565247 | bayes_pls_golite062009 |
| structural molecule activity | 1.9177190829469 | bayes_pls_golite062009 |
| telomeric DNA binding | 1.7847835613194 | bayes_pls_golite062009 |
| single-stranded telomeric DNA binding | 1.48033977789232 | bayes_pls_golite062009 |
| telomerase inhibitor activity | 1.25988289474883 | bayes_pls_golite062009 |
| DNA helicase activity | 1.12203697857261 | bayes_pls_golite062009 |
| exoribonuclease activity | 1.07725510169091 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 1.05277881555112 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 0.79554655100991 | bayes_pls_golite062009 |
| RNA polymerase activity | 0.79554655100991 | bayes_pls_golite062009 |
| transcription regulator activity | 0.756094573447167 | bayes_pls_golite062009 |
| hydrolase activity | 0.724860465280978 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.638831894247026 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 0.592562824942671 | bayes_pls_golite062009 |
| nuclease activity | 0.57381531077345 | bayes_pls_golite062009 |
| translation regulator activity | 0.515576958825022 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.468402630523277 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.378383789953688 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.325774164899685 | bayes_pls_golite062009 |
| exonuclease activity | 0.28313884527829 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.21650406007586 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.2080607201312 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.0954216620147701 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.0909806857084046 | bayes_pls_golite062009 |
| transcription factor activity | 0.0591886273075271 | bayes_pls_golite062009 |
| protein binding | 0.0528188351789111 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.0179535526984695 | bayes_pls_golite062009 |
| helicase activity | 0.0121541775159524 | bayes_pls_golite062009 |
