| Protein: | ltd-PB |
| Organism: | Drosophila melanogaster |
| Length: | 686 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ltd-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
258.0 | [0..361] | [686..72] |
|
Region A: Residues: [1-133] |
1 11 21 31 41 51
| | | | | |
1 MPNVDEQRGK AATKRAESEQ SEEKGDRQEG DGDPKDESEE ATAKIKGRSR FTAALRSLSK 60
61 TKTKRERELD KSTDRETRSA EEEAQETPGE LEDVASSIST DSGALGKTKK KSLTRRLLLG 120
121 GLRKSGKTPK GRP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [134-298] |
1 11 21 31 41 51
| | | | | |
1 HSLATSDDIS VEHLETTPLP SPPGSPTSAG SSTLQITISG KKVEPSPAKK SGKSRPKSDT 60
61 DYLTPAAEER KPRKKTTTTT VTTRDTSSST RTTKLLVSKK KPQSPERESP SASPSPLITT 120
121 TESTRDTPPR ERAPAKPSRV QSASGTGAVR KSQSSSASSR KLELM
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [299-469] |
1 11 21 31 41 51
| | | | | |
1 QQQQQRGHRL NARPLAELAN TEPQPSGQQS LDPSTSPPAA EDGVSSAESA QTIANPPPVV 60
61 RFEVGSAVRS PLSAYEAALA AAASQQPNSN EELSDSSIRR LSFAQQQLIL GDHDSIEGRR 120
121 ETLHYQSVAS EYSNQDSGSE DDSEEQADTT EPENAKPMPA FGDLTMDQEM E
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [470-686] |
1 11 21 31 41 51
| | | | | |
1 PAIMTSTSDK REHLYKILVI GELGTGKTSF IKRYVHQFFS QNYRATIGVD FALKVLQWDA 60
61 NTIVRLQLWD IAGQERFGNM TRVYYKEAVG AFIVFDVTRS GTFDCVSKWK EDLDSKVQLP 120
121 DGSPIPCILL ANKCDQEKQG IITQPEKMDE YVRENGFAGW FETSAKENIN IDEAARALVN 180
181 KILINDKLIS ADLADGDKFN LSAADATGSD AKNKCSC
|
| Detection Method: | |
| Confidence: | 65.0 |
| Match: | 2bcgY |
| Description: | Structure of doubly prenylated Ypt1:GDI complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| GTPase activity | 4.52394549632777 | bayes_pls_golite062009 |
| hydrolase activity | 3.63069754092699 | bayes_pls_golite062009 |
| microtubule motor activity | 3.4297361345158 | bayes_pls_golite062009 |
| motor activity | 3.3674051903467 | bayes_pls_golite062009 |
| actin binding | 3.33639699088484 | bayes_pls_golite062009 |
| microfilament motor activity | 3.17800963620802 | bayes_pls_golite062009 |
| signal recognition particle binding | 3.10924684520019 | bayes_pls_golite062009 |
| transporter activity | 3.10463051760206 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.95886887664984 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.95079405147356 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.87427509025394 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.85499564954033 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.85178667290149 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 2.61775212528604 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 2.61467977505707 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 2.57552435627908 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 2.57107347424517 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 2.57054427875021 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 2.50494515048649 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.43862163407966 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.4101693596493 | bayes_pls_golite062009 |
| ATPase activity | 2.39535714892224 | bayes_pls_golite062009 |
| actin filament binding | 2.24723363507804 | bayes_pls_golite062009 |
| nucleic acid binding | 2.21184938313192 | bayes_pls_golite062009 |
| ribonucleoprotein binding | 2.04103162399905 | bayes_pls_golite062009 |
| proton-transporting ATPase activity, rotational mechanism | 1.95782378818812 | bayes_pls_golite062009 |
| DNA binding | 1.94055378599526 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.91091452720653 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 1.89320355239381 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 1.88721318481223 | bayes_pls_golite062009 |
| GTP binding | 1.87900088157196 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.85943679361938 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.85937484083653 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.8521191028835 | bayes_pls_golite062009 |
| nucleotide binding | 1.84603132945448 | bayes_pls_golite062009 |
| transcription regulator activity | 1.83584389083042 | bayes_pls_golite062009 |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 1.81972511638668 | bayes_pls_golite062009 |
| kinase activity | 1.80889641165674 | bayes_pls_golite062009 |
| 1.75135117904448 | bayes_pls_golite062009 | |
| protein transporter activity | 1.71214667007262 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 1.63949223587737 | bayes_pls_golite062009 |
| tubulin binding | 1.62788446088451 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.60386625568858 | bayes_pls_golite062009 |
| actin-dependent ATPase activity | 1.58897222423517 | bayes_pls_golite062009 |
| ATP binding | 1.5859264197035 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.56325751172863 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 1.55520429131224 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 1.53158018507951 | bayes_pls_golite062009 |
| microtubule binding | 1.44471873069962 | bayes_pls_golite062009 |
| antigen binding | 1.43656260286121 | bayes_pls_golite062009 |
| RNA helicase activity | 1.42791449104435 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 1.39335733374328 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 1.36724390116598 | bayes_pls_golite062009 |
| apolipoprotein receptor activity | 1.31055516357904 | bayes_pls_golite062009 |
| syntaxin-13 binding | 1.31055516357904 | bayes_pls_golite062009 |
| apolipoprotein A-I binding | 1.31055516357904 | bayes_pls_golite062009 |
| apolipoprotein A-I receptor activity | 1.31055516357904 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| peptidase activity | 1.21715427137954 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.14475274823167 | bayes_pls_golite062009 |
| protein kinase activity | 1.12864835254143 | bayes_pls_golite062009 |
| nucleotide kinase activity | 1.10251779925246 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.977237423302079 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.961168578530073 | bayes_pls_golite062009 |
| transferase activity, transferring glycosyl groups | 0.889480122725603 | bayes_pls_golite062009 |
| protein methyltransferase activity | 0.876296121718575 | bayes_pls_golite062009 |
| plus-end-directed microtubule motor activity | 0.773586048423911 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.762584163889896 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.75383985982414 | bayes_pls_golite062009 |
| transcription activator activity | 0.739301862805678 | bayes_pls_golite062009 |
| RNA binding | 0.715902454627085 | bayes_pls_golite062009 |
| transcription factor activity | 0.697256579145077 | bayes_pls_golite062009 |
| signal transducer activity | 0.683309012097319 | bayes_pls_golite062009 |
| molecular transducer activity | 0.683309012097319 | bayes_pls_golite062009 |
| endopeptidase activity | 0.666240085427003 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.661834961742057 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.652333406433794 | bayes_pls_golite062009 |
| receptor activity | 0.633514002718998 | bayes_pls_golite062009 |
| histone methyltransferase activity | 0.63002958837536 | bayes_pls_golite062009 |
| helicase activity | 0.6191010101321 | bayes_pls_golite062009 |
| sterol transporter activity | 0.57614280790431 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.557919489256916 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.49000746592281 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 0.46552249844591 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 0.444874730945263 | bayes_pls_golite062009 |
| structural constituent of muscle | 0.411137875876923 | bayes_pls_golite062009 |
| phosphotransferase activity, phosphate group as acceptor | 0.40217318916177 | bayes_pls_golite062009 |
| drug transmembrane transporter activity | 0.38711726712063 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.345873656782869 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 0.325013574811283 | bayes_pls_golite062009 |
| receptor binding | 0.309955875731734 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.29664013896754 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.29664013896754 | bayes_pls_golite062009 |
| myosin binding | 0.274885859454447 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.208665086324262 | bayes_pls_golite062009 |
| translation release factor activity | 0.178286731022211 | bayes_pls_golite062009 |
| translation termination factor activity | 0.151456842619444 | bayes_pls_golite062009 |
| nucleobase, nucleoside, nucleotide kinase activity | 0.12351419478929 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 0.123304946374679 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 0.092554747196014 | bayes_pls_golite062009 |
| G-protein-coupled receptor binding | 0.0436504490626262 | bayes_pls_golite062009 |
| microtubule plus-end binding | 0.040298400888525 | bayes_pls_golite062009 |
| serine hydrolase activity | 0.0365009097431372 | bayes_pls_golite062009 |
| serine-type peptidase activity | 0.0168560258237966 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.0111338193708552 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 0.00571427458217011 | bayes_pls_golite062009 |
| macromolecule transmembrane transporter activity | 0.00571427458217011 | bayes_pls_golite062009 |
