| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.19312034543] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein phosphatase type 2A complex | 7.579E-7 | 2 | 6 | 2 | 6292 |
| protein serine/threonine phosphatase complex | 6.8716E-6 | 2 | 17 | 2 | 6292 |
| microtubule organizing center | 9.8679E-5 | 2 | 63 | 2 | 6292 |
| spindle pole body | 9.8679E-5 | 2 | 63 | 2 | 6292 |
| spindle pole | 1.151E-4 | 2 | 68 | 2 | 6292 |
| spindle | 1.9786E-4 | 2 | 89 | 2 | 6292 |
| microtubule cytoskeleton | 2.8118E-4 | 2 | 106 | 2 | 6292 |
| cellular bud neck | 4.1715E-4 | 2 | 129 | 2 | 6292 |
| cellular bud | 6.9196E-4 | 2 | 166 | 2 | 6292 |
| site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
| cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
| cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein phosphatase type 2A regulator activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| phosphatase regulator activity | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| protein phosphatase regulator activity | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| protein serine/threonine phosphatase activity | 8.248E-3 | 2 | 26 | 1 | 6292 |