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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Kap104. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 9 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

outer membrane 1.6491E-3 9 178 3 6292
organelle outer membrane 1.6491E-3 9 178 3 6292
box H/ACA snoRNP complex 2.859E-3 9 2 1 6292
nuclear membrane-endoplasmic reticulum network 3.5247E-3 9 232 3 6292
nuclear outer membrane 6.2461E-3 9 86 2 6292
nuclear membrane 7.8919E-3 9 97 2 6292
preribosome, small subunit precursor 8.5551E-3 9 6 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mRNA polyadenylation 3.0714E-4 9 19 2 6292
RNA polyadenylation 5.8072E-4 9 26 2 6292
mRNA 3'-end processing 8.278E-4 9 31 2 6292
RNA 3'-end processing 1.5203E-3 9 42 2 6292
regulation of exocytosis 4.2857E-3 9 3 1 6292
regulation of secretion 4.2857E-3 9 3 1 6292
regulation of cellular localization 7.1338E-3 9 5 1 6292
regulation of vesicle-mediated transport 8.5551E-3 9 6 1 6292
phosphoinositide dephosphorylation 9.9746E-3 9 7 1 6292
poly(A)+ mRNA export from nucleus 9.9746E-3 9 7 1 6292
phospholipid dephosphorylation 9.9746E-3 9 7 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RNA binding 1.1347E-3 9 367 4 6292
nuclear localization sequence binding 4.2857E-3 9 3 1 6292
poly-purine tract binding 7.1338E-3 9 5 1 6292
poly(A) RNA binding 7.1338E-3 9 5 1 6292
single-stranded RNA binding 7.1338E-3 9 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle