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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Yjl069c. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 7 proteins

Complex Member Proteins

Protein

GO Cellular Component GO Biological Process GO Molecular Function
CKA2
  • protein kinase CK2 complex
  • G2/M transition of mitotic cell cycle
  • G1/S transition of mitotic cell cycle
  • flocculation via cell wall protein-carbohydrate interaction
  • protein amino acid phosphorylation
  • response to DNA damage stimulus
  • regulation of transcription from RNA polymerase III promoter
  • regulation of transcription from RNA polymerase I promoter
  • cellular ion homeostasis
  • protein kinase CK2 activity
  • CKB1
  • protein kinase CK2 complex
  • G2/M transition of mitotic cell cycle
  • G1/S transition of mitotic cell cycle
  • flocculation via cell wall protein-carbohydrate interaction
  • protein amino acid phosphorylation
  • response to DNA damage stimulus
  • regulation of transcription from RNA polymerase III promoter
  • regulation of transcription from RNA polymerase I promoter
  • cellular ion homeostasis
  • protein kinase CK2 regulator activity
  • DIP2
  • small nucleolar ribonucleoprotein complex
  • maturation of SSU-rRNA
  • ribosome biogenesis
  • snoRNA binding
  • PWP2
  • cytoplasm
  • nuclear outer membrane
  • 90S preribosome
  • small nucleolar ribonucleoprotein complex
  • maturation of SSU-rRNA
  • cytokinesis
  • ribosome biogenesis
  • snoRNA binding
  • UTP13
  • small nucleolar ribonucleoprotein complex
  • maturation of SSU-rRNA
  • snoRNA binding
  • UTP18
  • nuclear outer membrane
  • nucleolus
  • small nucleolar ribonucleoprotein complex
  • ribosome biogenesis
  • molecular_function
  • UTP21
  • nucleus
  • nuclear outer membrane
  • nucleolus
  • small nucleolar ribonucleoprotein complex
  • ribosome biogenesis
  • snoRNA binding
  • Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    small nucleolar ribonucleoprotein complex 3.5178E-9 7 72 5 6292
    protein kinase CK2 complex 6.3596E-6 7 4 2 6292
    ribonucleoprotein complex 6.5267E-5 7 514 5 6292
    macromolecular complex 7.9244E-5 7 1635 7 6292
    nuclear outer membrane 8.2954E-5 7 86 3 6292
    nuclear membrane 1.1888E-4 7 97 3 6292
    outer membrane 7.1655E-4 7 178 3 6292
    organelle outer membrane 7.1655E-4 7 178 3 6292
    nuclear envelope 9.9288E-4 7 199 3 6292
    nuclear membrane-endoplasmic reticulum network 1.5515E-3 7 232 3 6292
    endomembrane system 7.2588E-3 7 398 3 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    regulation of transcription from RNA polymerase I promoter 6.3596E-6 7 4 2 6292
    ribosome biogenesis 9.3668E-6 7 346 5 6292
    ribonucleoprotein complex biogenesis 1.3745E-5 7 374 5 6292
    regulation of transcription from RNA polymerase III promoter 2.2223E-5 7 7 2 6292
    maturation of SSU-rRNA 2.6695E-5 7 59 3 6292
    flocculation via cell wall protein-carbohydrate interaction 4.7546E-5 7 10 2 6292
    flocculation 5.8081E-5 7 11 2 6292
    rRNA processing 2.7117E-4 7 128 3 6292
    cellular component biogenesis 2.7953E-4 7 694 5 6292
    rRNA metabolic process 3.3156E-4 7 137 3 6292
    G2/M transition of mitotic cell cycle 4.2467E-4 7 29 2 6292
    transcription from RNA polymerase I promoter 4.5476E-4 7 30 2 6292
    transcription from RNA polymerase III promoter 7.3181E-4 7 38 2 6292
    ncRNA processing 1.2438E-3 7 215 3 6292
    G1/S transition of mitotic cell cycle 1.2671E-3 7 50 2 6292
    RNA metabolic process 1.2754E-3 7 954 5 6292
    ncRNA metabolic process 2.0862E-3 7 257 3 6292
    interphase of mitotic cell cycle 4.6971E-3 7 97 2 6292
    interphase 4.6971E-3 7 97 2 6292
    gene expression 5.0816E-3 7 1283 5 6292
    protein amino acid phosphorylation 5.2825E-3 7 103 2 6292
    RNA processing 6.3721E-3 7 380 3 6292
    cellular chemical homeostasis 7.0004E-3 7 119 2 6292
    cellular ion homeostasis 7.0004E-3 7 119 2 6292
    cellular homeostasis 7.1153E-3 7 120 2 6292
    chemical homeostasis 7.465E-3 7 123 2 6292
    ion homeostasis 7.465E-3 7 123 2 6292
    nucleic acid metabolic process 7.9545E-3 7 1415 5 6292
    multi-organism process 9.9944E-3 7 143 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    snoRNA binding 1.6706E-8 7 31 4 6292
    RNA binding 3.4624E-4 7 367 4 6292
    protein kinase CK2 regulator activity 2.224E-3 7 2 1 6292
    protein kinase CK2 activity 2.224E-3 7 2 1 6292
    obsolete_molecular_function 2.4022E-3 7 69 2 6292
    nucleic acid binding 3.3506E-3 7 666 4 6292

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle