YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Top2. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein kinase CK2 complex 3.0297E-6 5 4 2 6292
ribonuclease H2 complex 2.3825E-3 5 3 1 6292
synaptonemal complex 3.9682E-3 5 5 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of transcription from RNA polymerase I promoter 3.0297E-6 5 4 2 6292
regulation of transcription from RNA polymerase III promoter 1.0594E-5 5 7 2 6292
flocculation via cell wall protein-carbohydrate interaction 2.2679E-5 5 10 2 6292
flocculation 2.771E-5 5 11 2 6292
protein amino acid phosphorylation 4.1609E-5 5 103 3 6292
G2/M transition of mitotic cell cycle 2.0338E-4 5 29 2 6292
phosphorylation 2.1711E-4 5 179 3 6292
transcription from RNA polymerase I promoter 2.1784E-4 5 30 2 6292
cell cycle 2.2393E-4 5 525 4 6292
transcription from RNA polymerase III promoter 3.5115E-4 5 38 2 6292
phosphorus metabolic process 4.5074E-4 5 229 3 6292
phosphate metabolic process 4.5074E-4 5 229 3 6292
response to DNA damage stimulus 4.927E-4 5 236 3 6292
nucleic acid metabolic process 5.7208E-4 5 1415 5 6292
G1/S transition of mitotic cell cycle 6.0956E-4 5 50 2 6292
cellular response to stress 9.043E-4 5 290 3 6292
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 9.5045E-4 5 1566 5 6292
regulation of cellular process 1.1441E-3 5 796 4 6292
regulation of biological process 1.3089E-3 5 824 4 6292
post-translational protein modification 1.6626E-3 5 357 3 6292
cellular nitrogen compound metabolic process 1.7545E-3 5 1770 5 6292
nitrogen compound metabolic process 1.8612E-3 5 1791 5 6292
cell cycle phase 1.9341E-3 5 376 3 6292
cellular response to stimulus 1.9794E-3 5 379 3 6292
interphase of mitotic cell cycle 2.2823E-3 5 97 2 6292
interphase 2.2823E-3 5 97 2 6292
homeostatic process 2.453E-3 5 408 3 6292
regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 2.5772E-3 5 415 3 6292
regulation of nitrogen compound metabolic process 2.5953E-3 5 416 3 6292
cellular chemical homeostasis 3.4173E-3 5 119 2 6292
cellular ion homeostasis 3.4173E-3 5 119 2 6292
cellular homeostasis 3.4741E-3 5 120 2 6292
chemical homeostasis 3.6472E-3 5 123 2 6292
DNA replication 3.6472E-3 5 123 2 6292
ion homeostasis 3.6472E-3 5 123 2 6292
regulation of mitotic recombination 3.9682E-3 5 5 1 6292
regulation of macromolecule metabolic process 4.1189E-3 5 488 3 6292
cell cycle process 4.1678E-3 5 490 3 6292
response to stress 4.3416E-3 5 497 3 6292
protein modification process 4.3922E-3 5 499 3 6292
regulation of primary metabolic process 4.783E-3 5 514 3 6292
multi-organism process 4.9038E-3 5 143 2 6292
cellular macromolecule biosynthetic process 5.3579E-3 5 1187 4 6292
macromolecule biosynthetic process 5.3925E-3 5 1189 4 6292
regulation of cellular metabolic process 5.3949E-3 5 536 3 6292
regulation of metabolic process 5.7186E-3 5 547 3 6292
biological regulation 5.8209E-3 5 1213 4 6292
regulation of biological quality 5.8393E-3 5 551 3 6292
cellular macromolecule metabolic process 6.2991E-3 5 2285 5 6292
DNA topological change 6.3431E-3 5 8 1 6292
macromolecule modification 6.4022E-3 5 569 3 6292
DNA metabolic process 6.9303E-3 5 585 3 6292
macromolecule metabolic process 7.2329E-3 5 2349 5 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA topoisomerase (ATP-hydrolyzing) activity 7.9466E-4 5 1 1 6292
obsolete_molecular_function 1.1603E-3 5 69 2 6292
protein kinase CK2 activity 1.5888E-3 5 2 1 6292
protein kinase CK2 regulator activity 1.5888E-3 5 2 1 6292
ribonuclease H activity 3.9682E-3 5 5 1 6292
DNA topoisomerase activity 4.7604E-3 5 6 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle