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View Protein Complex Details

Complex Overview

From Publication: Mewes, H. W. et al. MIPS: Analysis and annotation of proteins from whole genomes. Nucleic Acids Res. 32, D41-D44
Notes: MIPS hand-curated complex set. MIPS complex ID: 410.40.20
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA replication factor A complex 2.4099E-11 3 3 3 6292
nuclear replisome 1.9664E-8 3 18 3 6292
replisome 1.9664E-8 3 18 3 6292
nuclear replication fork 2.7472E-8 3 20 3 6292
chromosome, telomeric region 7.0488E-8 3 27 3 6292
replication fork 2.7665E-7 3 42 3 6292
protein-DNA complex 7.0513E-7 3 57 3 6292
nuclear chromosome part 2.7115E-5 3 190 3 6292
nuclear chromosome 4.698E-5 3 228 3 6292
chromosomal part 5.2792E-5 3 237 3 6292
chromosome 8.1719E-5 3 274 3 6292
non-membrane-bounded organelle 3.5313E-3 3 959 3 6292
intracellular non-membrane-bounded organelle 3.5313E-3 3 959 3 6292
nuclear part 5.3751E-3 3 1103 3 6292
protein complex 5.8881E-3 3 1137 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA replication, synthesis of RNA primer 2.4099E-10 3 5 3 6292
DNA unwinding involved in replication 8.7719E-9 3 14 3 6292
postreplication repair 1.9664E-8 3 18 3 6292
DNA geometric change 2.7472E-8 3 20 3 6292
DNA duplex unwinding 2.7472E-8 3 20 3 6292
double-strand break repair via homologous recombination 3.7112E-8 3 22 3 6292
recombinational repair 6.2656E-8 3 26 3 6292
DNA strand elongation 1.0832E-7 3 31 3 6292
DNA strand elongation involved in DNA replication 1.0832E-7 3 31 3 6292
nucleotide-excision repair 2.033E-7 3 38 3 6292
double-strand break repair 7.0513E-7 3 57 3 6292
DNA conformation change 7.4359E-7 3 58 3 6292
DNA-dependent DNA replication 2.1342E-6 3 82 3 6292
DNA recombination 5.7949E-6 3 114 3 6292
DNA replication 7.2927E-6 3 123 3 6292
DNA repair 2.7985E-5 3 192 3 6292
response to DNA damage stimulus 5.2124E-5 3 236 3 6292
cellular response to stress 9.6946E-5 3 290 3 6292
cellular response to stimulus 2.1693E-4 3 379 3 6292
response to stress 4.901E-4 3 497 3 6292
RNA biosynthetic process 5.2344E-4 3 508 3 6292
DNA metabolic process 7.9998E-4 3 585 3 6292
response to stimulus 1.7981E-3 3 766 3 6292
RNA metabolic process 3.4763E-3 3 954 3 6292
cellular macromolecule biosynthetic process 6.7003E-3 3 1187 3 6292
macromolecule biosynthetic process 6.7343E-3 3 1189 3 6292
telomere maintenance via recombination 7.6106E-3 3 16 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA binding 6.6597E-5 3 256 3 6292
nucleic acid binding 1.1811E-3 3 666 3 6292
damaged DNA binding 5.2364E-3 3 11 1 6292
single-stranded DNA binding 7.6106E-3 3 16 1 6292
binding 8.6823E-3 3 1294 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle